Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0378 ATGGAGGAAAGGTATGAGGCATTGAAGGATCTTGGTTCTGGGAATTTTGGAGTGGCCAGGTTGGTCAGAGATAAGAAGACTAGAGAGCTTGTTGCTGTCAAATACATTGAAAGAGGGAAAAAGATTGATGAGAATGTTCAAAGGGAGATCATCAACCACCGATCTTTAACGCATCCAAACATAATCAAGTTCAAAGAGGTCGTGCTGACTCCAACCCATTTGGCTATTGTCATGGAGTACGCTGCAGGCGGTGAACTCTTTGAGAGGATATGCAGTGCTGGTCGATTCAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAGCTAATTTCTGGAGTTAGCTACTGTCATTCAATGGAGATTTGTCACAGAGATCTGAAATTGGAGAACACTCTCTTGGATGGAAATCCGAATCCTCGAGTTAAAATATGTGACTTTGGTTACTCCAAGTCTGCATTACTTCATTCTCAACCTAAATCAACAGTTGGAACTCCGGCTTACATTGCTCCTGAGGTTCTGTCCCGTAAGGAGTATGATGGAAAGATTGCAGACGTATGGTCCTGTGGTGTGACTTTGTATGTCATGTTAGTGGGAGCATACCCTTTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACAATTGGGGTGAGCATTTACAGAATAATGAGCGTTCAGTACAGCATACCAGACTATGTACGCGTCTCCGCGGATTGCAGACATCTTCTATCTCGCATATTTGTCGCCAATCCTGCTAAGAGGATAAGCATACCAGAGATAAAACAGCATCCATGGTTTCTGAAGAACTTGGCGAATGAGACGGCGAAAGGGAAGGAGGAAGGAGAGAAAGAGGAAGGAAGGCAGAGTGTGGAAGAGATAATGAAGATCATACAAGAGGCAAGAACTACTGCAGTGGGGCAAGGATCCAACGGTGGAGGCCTAGTTAGTGGACGAGGGTCTTTGGACGGTGGAGATCTTCAGGCAGATGAGGAATCTGAAGTTGATATTAGTGGTGACTATTCTGAGAACTAG 1029 0.4451 MEERYEALKDLGSGNFGVARLVRDKKTRELVAVKYIERGKKIDENVQREIINHRSLTHPNIIKFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGNPNPRVKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGVSIYRIMSVQYSIPDYVRVSADCRHLLSRIFVANPAKRISIPEIKQHPWFLKNLANETAKGKEEGEKEEGRQSVEEIMKIIQEARTTAVGQGSNGGGLVSGRGSLDGGDLQADEESEVDISGDYSEN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0378 342 FunFam Serine/threonine-protein kinase SRK2E 81 273 - -
Mibi10g0378 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Mibi10g0378 342 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Mibi10g0378 342 SUPERFAMILY Protein kinase-like (PK-like) 3 270 IPR011009 -
Mibi10g0378 342 Gene3D Transferase(Phosphotransferase) domain 1 81 273 - -
Mibi10g0378 342 ProSiteProfiles Protein kinase domain profile. 5 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0378 342 MobiDBLite consensus disorder prediction 300 342 - -
Mibi10g0378 342 MobiDBLite consensus disorder prediction 325 342 - -
Mibi10g0378 342 PANTHER SERINE/THREONINE KINASE 3 290 - -
Mibi10g0378 342 Pfam Protein kinase domain 5 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0378 342 SMART serkin_6 5 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0378 342 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Mibi10g0378 342 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Mibi10g0378 342 CDD STKc_SnRK2 4 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0378 Mibi-ChrMibi10 6087313 6090434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0378 4 316 CBL-interacting serine-threonine protein kinases AT2G30360 38.462 4.39e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mibi10g0378 Pkinase 9.6e-73 CL0016