Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0371 ATGAACTGTTTCTTCTTCAAAAAGAAATCTGATAACAACAGTAGGGGAGAAGCGAAATCGGCGCCGGAATTACAGAACGAGAGGCGGAGGAATAATAACCCGGCGTTGAACCGGGTTTGCAAATCCACGAGCTCGATTCCCTCGCCGAGGAGCTTGACGGAGTTGTACAAAGAGAAAGCCAAGGATAATGGTTTCAGGGTTTTTAGTTTGCAGGAGCTTCAAGAAGCTACCAATGGGTTTAATAGGATGCTTAAGATTGGTGAGGGTGGTTTTGGGAGTGTTTATAAAGGTACCATTAGGCCTCCTGGTGGTCGAGGCGATCCACTTGTTGTAGCCATCAAAAAGCTCAACAAGCATGGCTTTCAGGGTCACAAAGAATGGCTTGCTGAGGTTCAATTTCTTGGCGTTGTGAATCATCCAAATCTGGTTAAACTTCTGGGATACTGCTCTGTCGATGGAGAAAGAGGGATTCAACGGATGTTAGTGTATGAGTATATGGCAAATAGAAGCCTAGAACCTCATCTCTTTAGTTCTTCTCTTCCTACCTTGCCTTGGAAAACAAGATTGCAAATCATGATCGGTGCTGCACAAGGATTAGCCTATTTGCACGAAGGATTGGAATTTCAGGTGATTTACCGAGATTTCAAAACTTCGAATGTTCTATTGGATGAGAATTTCCACCCAAAGCTCTCAGACTTTGGTCTTGCAAGGGAAGGCCCCCAAGGCGATAATACTCATGTATCTACTGCGGTTGTTGGAACACAAGGCTATGCTGCCCCAGAGTATGTAGAAACAGGGCATCTCAAAGTTGAATGTGACATTTACAGTTTTGGAGTGGTACTATATGAGATCATCACAGGTAGGCGAGCATTAGACCGAAACCGTCCCGCTGCAGAACAAAAACTTTTAAGTTGGGTTAAACAGTATCCTGCTGACACTGGCAGATTCAGCATGATCATTGACCCACGTCTCAGAAATCATTTTTCTCCCGGCGCAGTTCGCAAAGTTGCTAAGTTGGCTGATGCCTGTACGAGTAAGAATCCTAAAGATAGACCAACCATGGCTCAAATAGTGGAAAGCTTGAAGGAAGCATTGCAGGTTTCAGAGACCTCCGATACTTCTCAGCGCCCAACTCCTGAATCATCTCGATCTTCTTTGGCTCGAAAAGGTAAACAAATAGCTTAA 1185 0.4456 MNCFFFKKKSDNNSRGEAKSAPELQNERRRNNNPALNRVCKSTSSIPSPRSLTELYKEKAKDNGFRVFSLQELQEATNGFNRMLKIGEGGFGSVYKGTIRPPGGRGDPLVVAIKKLNKHGFQGHKEWLAEVQFLGVVNHPNLVKLLGYCSVDGERGIQRMLVYEYMANRSLEPHLFSSSLPTLPWKTRLQIMIGAAQGLAYLHEGLEFQVIYRDFKTSNVLLDENFHPKLSDFGLAREGPQGDNTHVSTAVVGTQGYAAPEYVETGHLKVECDIYSFGVVLYEIITGRRALDRNRPAAEQKLLSWVKQYPADTGRFSMIIDPRLRNHFSPGAVRKVAKLADACTSKNPKDRPTMAQIVESLKEALQVSETSDTSQRPTPESSRSSLARKGKQIA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0371 394 PANTHER OS01G0588500 PROTEIN-RELATED 35 365 - -
Mibi10g0371 394 MobiDBLite consensus disorder prediction 8 47 - -
Mibi10g0371 394 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 166 375 - -
Mibi10g0371 394 CDD STKc_IRAK 86 363 - -
Mibi10g0371 394 ProSitePatterns Protein kinases ATP-binding region signature. 86 115 IPR017441 GO:0005524
Mibi10g0371 394 Gene3D Phosphorylase Kinase; domain 1 52 165 - -
Mibi10g0371 394 Pfam Protein tyrosine and serine/threonine kinase 85 361 IPR001245 GO:0004672|GO:0006468
Mibi10g0371 394 ProSiteProfiles Protein kinase domain profile. 80 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0371 394 MobiDBLite consensus disorder prediction 27 47 - -
Mibi10g0371 394 Gene3D Transferase(Phosphotransferase) domain 1 166 386 - -
Mibi10g0371 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Mibi10g0371 394 SUPERFAMILY Protein kinase-like (PK-like) 61 361 IPR011009 -
Mibi10g0371 394 MobiDBLite consensus disorder prediction 10 26 - -
Mibi10g0371 394 MobiDBLite consensus disorder prediction 365 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0371 Mibi-ChrMibi10 5975886 5978231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0371 1 361 Glycoside Hydrolase AT3G07070 41.463 1.25e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi10g0371 PK_Tyr_Ser-Thr 7.9e-46 CL0016