Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0367 ATGCAACACCGACACGAACTCGACCAGTTCCTCCTAGCACAGGAAGCGGAATTACAACGAACATTAGCACAAAAGAGACGAAGACATTACCGAGATCTCCTCACGGCGGCGGAAGAAACCGTCACAAAACGGCTGAGAGAGAAAGACCTAGAAATCGAGAAACTCACGCGCATCAACGGCGATTTACAATCACGCGCCGCGAATCTCGCCGCCGAGTCACAAATCTGGCAGGCGAAAGCGAAAGCACAAGAAGAAACCGCCGCTTCTTTACAAGCTCAACTTCAACAAGCCATGGCGGTGAACTGTACGGCCTTAGAAAACAGAGACGACGGCGGAGGAGGAGGAGGAGGAGGAGATGACGCCGAGTCGGTTCACGTTGACCCGGTCCGGTTCGAACCGGCCGGTCCGAAGTGCAGAGGGTGTGGGAGGAAGGTGGCTTCGGTGGTGGTTTTGCCGTGTCGCCATCTTTGTTTGTGTACGGAATGCGAACTCCATTTTCGAGCTTGCCCTGTTTGCCTTTCTCTCAAAGATTCAATCGTTGAGGTTTTTCTTTCTTAG 558 0.5287 MQHRHELDQFLLAQEAELQRTLAQKRRRHYRDLLTAAEETVTKRLREKDLEIEKLTRINGDLQSRAANLAAESQIWQAKAKAQEETAASLQAQLQQAMAVNCTALENRDDGGGGGGGGDDAESVHVDPVRFEPAGPKCRGCGRKVASVVVLPCRHLCLCTECELHFRACPVCLSLKDSIVEVFLS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0367 185 Pfam Zinc finger, C3HC4 type (RING finger) 137 173 - -
Mibi10g0367 185 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 2 182 IPR017066 -
Mibi10g0367 185 ProSiteProfiles Zinc finger RING-type profile. 138 172 IPR001841 -
Mibi10g0367 185 Coils Coil 80 100 - -
Mibi10g0367 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 185 IPR013083 -
Mibi10g0367 185 Coils Coil 52 72 - -
Mibi10g0367 185 PIRSF SBP1_RNase_bind 1 185 IPR017066 -
Mibi10g0367 185 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 120 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0367 Mibi-ChrMibi10 5880930 5881664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0367 138 172 Miscellaneous Gene Families AT2G21380 42.857 1.85e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1639 12 32317027 32318371 Mibi10g0367 10 5880930 5881664 CCT
Mibi10g0367 10 5880930 5881664 Mibi10g0367 10 5880930 5881664 ECH