Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0352 ATGGTTTGCACTACTAGCGATATACAGAAGTGGAAAGATTTTCCAAAGGGACTTAGGATTCTGCTCCTTGATGGAGACATCAGTTCTGCTTCAGAGATAAGAACAAAGCTCGAGTCCATGGACTATATTGTTTCTACATTCTGTGATGAGAATGAAGCCTTGTCAGCAATCTCCAGCAAACCTGAAAGCTTCCATGTTGCCATAGTGGAGGTTAGTACCAGCAGCCTGGGAAGTTTCAAAATTCTTGAGCATGCTAAAGACCTGCCTATCATCATGACTTCAAACGCTCACTGCTTAAGCACCATGATGAAGTGTGTAGCGCTTGGTGCAGTTGAGTTCCTAAGCAAACCACTCTCCGAGGAAAAACTCAGGAATATCTGGCAGCATGTAGTTCACAAGGCATTCAACACTGGGACAAGTGTCCTGCCTAAATCACTTGAACTTGTCAAAGAATCTGCGGTATTGCAGCTTCAGACAGATGGTGGAGCACATGAAACTGTGAATTTGGAGGAGTCTAGGTTCAGTGATGATGACCATGAGCAGTCTGCAGGAAATGACAAGTACCCAGCTCCTTCAACTCCACAATTAAAACATGGGGCAAGGTTAATGGACCATGGTGGTTGCCAAGAACAAACTAATTGTTCCCCTGAAAAGGAAAGTGAGGACCATGATGGAGAATCTAAATTTGTCGAAACTACGTGTGGGATTTTGAATTCTGAAGGTACTTGTCAACCGGTAAAACCTGAAAAGGCTCCAAACATGGAGGATGGGAACCTTGAAAATGATTCTAAGAGTGAGAAAGTTGTTTCTCCACCTGCACATGATAGTGTTCTTAGCAACATTGAAGGTGATACTGTATCTCCAAATAAGGCAGGTGTTCATAGTGATTCCCGTCATATCAAAACTAAGAAAAAGGTAGACTGGACACCTCAGTTGCACAAAAAGTTTGTAAAGGCAGTGGAACAATTAGGGGTTGATCAAGCAATTCCTTCTCGGATACTGGAATTGATGAATGTGGAAGGCTTGACGAGGCATAATGTGGCAAGCCATCTTCAGAAATATAGAATGCATAGGAGGCAAATCTTGCCGAAGGAAGATCGAAGTTGGGTTCAAAGACCAGTTATGTCATTCCCTCCACATTATTCTAACTGCACCCCATCACCGGCTTCTGTGTACCCTATTTGGGGACAATCTGGCAGTCAACCAGCCATTATGCATGCTTGGGGTCCACCTGGTTATCCACTGTGGCATCCTACTGAAAGTTGGCACTGGAAGCCATATCATGGGATAAATGCAGATGCGTGGGGTTGCCCAGTGTTGCCAGCTCCTCAAAGTCCTTGTATTTCGTACTCTCAGAATATACCAGGATGGCACAATGCTAATGCAGTTAATTATAGCTCGAGCAAGTCACAGAATTCCTGTGAATATCATCCAGCAGAAGAAGTTGTTGACAAGGCAGTGAAAGAGGCAATAAGCAAGCCATGGCTACCAATGCCTTTAGGCCTCAAACCTCCTTCCATTGATTGTGTGTTATCAGAGCTCTCTAGGCAAGGCATTCCCACCATCCCTCCTTGCTCCAGGCCGGCTAAACCGGAACCCGAACCCAAACCCCAGTGA 1617 0.4484 MVCTTSDIQKWKDFPKGLRILLLDGDISSASEIRTKLESMDYIVSTFCDENEALSAISSKPESFHVAIVEVSTSSLGSFKILEHAKDLPIIMTSNAHCLSTMMKCVALGAVEFLSKPLSEEKLRNIWQHVVHKAFNTGTSVLPKSLELVKESAVLQLQTDGGAHETVNLEESRFSDDDHEQSAGNDKYPAPSTPQLKHGARLMDHGGCQEQTNCSPEKESEDHDGESKFVETTCGILNSEGTCQPVKPEKAPNMEDGNLENDSKSEKVVSPPAHDSVLSNIEGDTVSPNKAGVHSDSRHIKTKKKVDWTPQLHKKFVKAVEQLGVDQAIPSRILELMNVEGLTRHNVASHLQKYRMHRRQILPKEDRSWVQRPVMSFPPHYSNCTPSPASVYPIWGQSGSQPAIMHAWGPPGYPLWHPTESWHWKPYHGINADAWGCPVLPAPQSPCISYSQNIPGWHNANAVNYSSSKSQNSCEYHPAEEVVDKAVKEAISKPWLPMPLGLKPPSIDCVLSELSRQGIPTIPPCSRPAKPEPEPKPQ 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0352 538 ProSiteProfiles Response regulatory domain profile. 19 131 IPR001789 GO:0000160
Mibi10g0352 538 MobiDBLite consensus disorder prediction 519 538 - -
Mibi10g0352 538 SMART REC_2 18 127 IPR001789 GO:0000160
Mibi10g0352 538 Pfam Response regulator receiver domain 20 126 IPR001789 GO:0000160
Mibi10g0352 538 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 300 359 IPR017930 -
Mibi10g0352 538 SUPERFAMILY Homeodomain-like 301 359 IPR009057 -
Mibi10g0352 538 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 524 IPR044825 GO:0003700|GO:0045893
Mibi10g0352 538 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 303 357 IPR006447 GO:0003677
Mibi10g0352 538 FunFam Two-component response regulator-like APRR2 17 142 - -
Mibi10g0352 538 MobiDBLite consensus disorder prediction 172 226 - -
Mibi10g0352 538 MobiDBLite consensus disorder prediction 276 302 - -
Mibi10g0352 538 Gene3D - 300 361 - -
Mibi10g0352 538 Gene3D - 18 139 - -
Mibi10g0352 538 SUPERFAMILY CheY-like 16 133 IPR011006 -
Mibi10g0352 538 Pfam Myb-like DNA-binding domain 306 355 IPR001005 -
Mibi10g0352 538 FunFam Two-component response regulator 300 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0352 Mibi-ChrMibi10 5683333 5687551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0352 1 526 Response Regulator Gene Family AT4G18020 49.372 4.84e-136 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mibi10g0352 Response_reg 6.4e-08 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1652 12 32568702 32574392 Mibi10g0352 10 5683333 5687551 CCT