Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0337 ATGGGAAGTGCACCATTACCACCAGGTTTTCGTTTCCACCCAACAGACGAAGAACTGGTCGGATATTATCTAAAAAGAAAAGTTGAAGGGCTTGAAATAGAGATTGAGGTTATCCCAGTCATTGATTTATACAAGTTTGATCCATGGGAATTACCAGAGAAATCATTCCTACCAAAGAGAGATATGGAGTGGTTTTTCTTTTGTCCACGAGATCGAAAGTACCCGAATGGATCGCGAACAAATAGAGCTACCAAAACTGGGTACTGGAAAGCCACTGGAAAAGACAGAAATGTAGTATGTCACTCTACTCCACTAACTGTTACAGGATTAAGAAAAACCCTTGTTTTCTATCGCGGAAGAGCTCCACTTGGAGATCGAACTGAGTGGATCATGCATGAGTATAGACTCAACAATGACTCTGATCTCTCATCACCTCGTTTTCAGGGTGGTTTTGCGTTGTGCAGAGTGATGAAGAGGAATGAGAAGGACAAGAGTTCGCAAGAAGAACAAAAGGGTAAGGCAGCAGGAAGAAGTTGCACCAGTAGGGATAATGAAGAAGCTTCAAAGAAGACTTTTCCATACAATGTAGCTAAAACAATGGCAGAACCAGAGCAAGCTTCTTCCTTCGAGTCCATCAACCCTTCACATTTTCATGTCTCTCCTGAATTAATTCTAGATTCCTCCAAGGACTACTCTCAAGTGCAAGATACAATTTCTGAGTACTTTCCACAGTACGACTTATCAAGTTCAATGAATCCATGGCAACCATTCCTAACAACAGAAAATTCAACCTCTTCATCTTACTCAAATGTAAGTGGAGAAATTGAATTTGCTGAAGATCTCAATCAGCTCGGCCACTTCTATGGAAATGAGCAAGAATCCCATGAAGGCTTTGATCAAATCAATTCATTCAGATATCCCAAACCGTTCTGA 933 0.4094 MGSAPLPPGFRFHPTDEELVGYYLKRKVEGLEIEIEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKTGYWKATGKDRNVVCHSTPLTVTGLRKTLVFYRGRAPLGDRTEWIMHEYRLNNDSDLSSPRFQGGFALCRVMKRNEKDKSSQEEQKGKAAGRSCTSRDNEEASKKTFPYNVAKTMAEPEQASSFESINPSHFHVSPELILDSSKDYSQVQDTISEYFPQYDLSSSMNPWQPFLTTENSTSSSYSNVSGEIEFAEDLNQLGHFYGNEQESHEGFDQINSFRYPKPF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0337 310 FunFam Nac domain-containing protein 86 15 162 - -
Mibi10g0337 310 MobiDBLite consensus disorder prediction 160 189 - -
Mibi10g0337 310 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Mibi10g0337 310 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Mibi10g0337 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 244 - -
Mibi10g0337 310 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Mibi10g0337 310 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Mibi10g0337 310 MobiDBLite consensus disorder prediction 160 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0337 Mibi-ChrMibi10 5465579 5466921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0337 1 304 NAC Transcription Factor Family AT4G17980 52.830 8.49e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi10g0337 NAM 3.1e-38 No_clan