Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0335 ATGGGTTGCACTGTAAGGGAAAAGCATCTCCGAGCGAATCGGAGGCCTCGATCATCCAAAACCGATATGGATTCTTCTTGTTGTTTTCTCGACAAGGCTTCCTTCCCTAAATCTATGCTTGAATCAAGCATGAAGAAGCCATTGAAAAACCATCTCGCTCTCAATGATTCGTCTCAGTCTCAGAATCTAAATCCCAATTCTAATCCCACCCTTAACCCTAATTTCTCCCTTAATAATATTGAGGAGACCGGATGGGGTTATTGCACGGAAGAACAATTGGAAGAAATTCTGTTAAAAAACTTGGAATATTTGTATAATGAAGCTGTATCAAAGCTTGTTTCGTTAGGATACGATGAGGATGTTGCTTTAAAAGCTATATTGCAAAATGGGCACTGTTATGGTGGAATGGATGTGCTCACCAATATATTACATAATTCGTTGGCTTATTTGAATAGTAATTGTAGTGGTATTAGTGCTAGTTGTAATGGCAATTTGGATGAGTCAGATCCTGTTTTCTCTGACTTGAGGCAGTTGGAGGAGTACTCTCTGGAAGGTATGGTTGGTTTGCTGCAGCAAGTGAGGCCACATTTGAGTAAAGGTGATGCTATGTGGTGTTTGCTTATGAGTGATCTTCATGTAGGACGGGCAAGTGCTATTGAAATTCCAGTGCTTCCTGCTTCAGGCGATGGTTGTGTAGCTCCTAATGCCTCTGAGGTTGTTAGCAATTCTGTTGGTGTTTTGGCCCCTACCATGTGTAGGTTTCATGGGGGTTGGGGATTTGGAAATGCGGGAGGCTCAGATCTCCCCTTCAATGGATTGTTCTCTTATAGTGCAGAGATGAATTTACAAAGAGATATTGAACTTCCCAAAAGGTTTAATCTTTCTCCTTCAATGAAGTCTTTATTGAAAAGAAATGTTGCAGTGTTCGCTGCTGGTTTTAGGGCAAATTCAAAACTATTGCAGACACAGGCTAAGGCCTTTCCGAGCACTAGCACTTTGTCAAGCTTGGAATCTCCAGTTGTATCAGGGGCTGATGTCCCAACTGAGCAGTCTGGGGATTTTCAGAATCTGAATAACCATGATGCTGTGAACTCAGTGTTGAGAAAATTCCGTGATCTGAATCTTGATGAGAATTTGGAGTTTGTGACTGAAGATAAAAAAGATGAGGTAATTGTCACTCTATTTCATCAGATTAAGGATCTTGAGAAACAGGTAAAGGAGCGAAAAGACTGGGCCCATCAGAAGGCAATGCAGGCTGCAAGAAAGCTTAGCAATGATTTGACTGAGCTGAAAATGTTGAGGATGGAAAGAGAGGAGACTCAGAGATTGAAGAAAGGGAAGCAAATGCTCGAGGACACAACCATGAAAAGACTCTCAGAGATGGAGAATGCTTTAAGAAAGGCCAGTGGTCAAGTGGACCGTGCAAATGCAGCTGTGAGACGGCTTGAGACAGAGAATGCAGAAATTAAAGCAGAGATGGAGGCTTCTAAATTAAGTGCATCAGAATCAGTTACAACTTGCATGCAAGCTGCAAAGAGGGAGAAAAAGTGCATGAAGAGGCTTGTAGCTTGGGAGAAACAGAAAGCTCAGCTACAGCTGGAGATATCAGGTGAGAAAGAGAAGATATTGAAGATACAGGAAGAATTGGTTTGGATCAAACAGCGTCAAAAAGATGCTGAGGTTAAGTGGTTGGAGGAGTTGAAGGCTAAAGAGGAAGCCTTAGGATTAGTTGAGGAGGAGCGACACACTAAGGAAGCAGCGGAGACTAATAATAAATGGAAGCTTGAAGCTTTGCGCCTAAAGATAGAGATAGATTTCCAACGCCACAAGGATGATCTCCGAAGACTTGAGCAGGAGCTTTCACGCTTAAAAGCATCTGCTCAGTCAGCAGAGTTTCAAAATCAATCAAACGCTTCACCTCTAACTGAGTCTGGGGGTGCGAAGCCCCAAAGAGAGACAATTGCTAAGATGCTTCAAGAATTAGAGAAGCTGGAGGCTTCTTCAGATAAAGAAGTAAACTGTGATAGGGAATGCATAATATGCATGAAAGATGAAGTCTCTGTTGTTTTCTTGCCTTGTGCCCACCAAGTTATGTGTGCTACTTGCAGCGATGAGTTTGGTAGAAAGATCAAAGCCACTTGTCCTTGCTGTCATGTTCCGATTGAGCAGAGGATTCGCGTATTCGGGGCAAGTTCGTAG 2199 0.4266 MGCTVREKHLRANRRPRSSKTDMDSSCCFLDKASFPKSMLESSMKKPLKNHLALNDSSQSQNLNPNSNPTLNPNFSLNNIEETGWGYCTEEQLEEILLKNLEYLYNEAVSKLVSLGYDEDVALKAILQNGHCYGGMDVLTNILHNSLAYLNSNCSGISASCNGNLDESDPVFSDLRQLEEYSLEGMVGLLQQVRPHLSKGDAMWCLLMSDLHVGRASAIEIPVLPASGDGCVAPNASEVVSNSVGVLAPTMCRFHGGWGFGNAGGSDLPFNGLFSYSAEMNLQRDIELPKRFNLSPSMKSLLKRNVAVFAAGFRANSKLLQTQAKAFPSTSTLSSLESPVVSGADVPTEQSGDFQNLNNHDAVNSVLRKFRDLNLDENLEFVTEDKKDEVIVTLFHQIKDLEKQVKERKDWAHQKAMQAARKLSNDLTELKMLRMEREETQRLKKGKQMLEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIKAEMEASKLSASESVTTCMQAAKREKKCMKRLVAWEKQKAQLQLEISGEKEKILKIQEELVWIKQRQKDAEVKWLEELKAKEEALGLVEEERHTKEAAETNNKWKLEALRLKIEIDFQRHKDDLRRLEQELSRLKASAQSAEFQNQSNASPLTESGGAKPQRETIAKMLQELEKLEASSDKEVNCDRECIICMKDEVSVVFLPCAHQVMCATCSDEFGRKIKATCPCCHVPIEQRIRVFGASS 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0335 732 MobiDBLite consensus disorder prediction 628 646 - -
Mibi10g0335 732 MobiDBLite consensus disorder prediction 1 24 - -
Mibi10g0335 732 PANTHER OS05G0141500 PROTEIN 1 727 IPR046934 -
Mibi10g0335 732 ProSiteProfiles Zinc finger RING-type profile. 678 718 IPR001841 -
Mibi10g0335 732 Pfam Family of unknown function (DUF6592) 100 217 IPR046527 -
Mibi10g0335 732 Coils Coil 458 499 - -
Mibi10g0335 732 SUPERFAMILY RING/U-box 668 724 - -
Mibi10g0335 732 Coils Coil 599 633 - -
Mibi10g0335 732 MobiDBLite consensus disorder prediction 628 649 - -
Mibi10g0335 732 Coils Coil 521 548 - -
Mibi10g0335 732 Pfam Zinc finger, C3HC4 type (RING finger) 675 723 - -
Mibi10g0335 732 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 661 729 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0335 Mibi-ChrMibi10 5424067 5428482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0335 678 728 C3H Transcription Factor Family AT1G73950 43.137 6.39e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1669 12 32780058 32783451 Mibi10g0335 10 5424067 5428482 CCT