Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0323 ATGCAGAGAAAGAACGCGCATGGACAAACCAATTGTCCATTTAAGTTGTGGAGTAATCAAACGCAACGTGAAATTGCTGGTGATTTGAGTTTTGCTTTTGGGGCTCATGATCAATTAGGCAGTTCATCACAGGAAAGCTTTGAAAGTTGTTGGAATTATAATACAGATACTAATAACTTGAATGTTGAAAATGGTATCATCATCACTAGCAATAACCCTTCAAGTTCTGAATCAGTCTTCATGCTTCAAGATAAGGCTTCTTTTGAAGATCCTTCAAATGGGTATAACTTGCAGAGTCAAACAAATGTTAAAGAAAGGGACAGGCGAGAGGGCAGAAGTACACGTGTCCATGATCACCTGCTTGCTGAGAGAATGAGAAGAGGAAAGATCTCCCAGCACTTCATTGCTCTTTCAGCCCTAATTCCTGGCCTCAAAAGGGCCGATAAGGCGTCTGTGCTGGAGGGAGCTATAAAGCACGTGAAGCAGCTTCAAGAACAAGTAAAAACACTGGAACAACATACCAAGAACAAGAAAACTACTGGAGAATCTATAGTGTTTGTGAAGAAGGGTCATCATCAAATGATATCTAGTTCGGACACGACGTGGTTTGATAATACAAAATGGAATAGAACAGTAGCAGAAGCAGATGTTGAAGCAAGGGTTTCAGACAAGAACGTGTTGATTCGAGTGCAATGTGAGAAACAAGAAGGAATAATGGTGAAGACAATAAAGGAGATAGAAAAACTCCACTTGTCTGTGATAAATAGTATTGTGATGCCATTTGGGAGGTCCATTCTGGACATCACCATCATAGCTGAGATGGAGGGTGAGTTTAACTTGAGCGGCAAGGAGCTCGCTAGAAATCTCAGGGTGGCACTCTTATTACAATCACTGTGA 897 0.4114 MQRKNAHGQTNCPFKLWSNQTQREIAGDLSFAFGAHDQLGSSSQESFESCWNYNTDTNNLNVENGIIITSNNPSSSESVFMLQDKASFEDPSNGYNLQSQTNVKERDRREGRSTRVHDHLLAERMRRGKISQHFIALSALIPGLKRADKASVLEGAIKHVKQLQEQVKTLEQHTKNKKTTGESIVFVKKGHHQMISSSDTTWFDNTKWNRTVAEADVEARVSDKNVLIRVQCEKQEGIMVKTIKEIEKLHLSVINSIVMPFGRSILDITIIAEMEGEFNLSGKELARNLRVALLLQSL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0323 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 117 175 IPR036638 GO:0046983
Mibi10g0323 298 PANTHER BHLH TRANSCRIPTION FACTOR 46 294 - -
Mibi10g0323 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 114 163 IPR011598 GO:0046983
Mibi10g0323 298 Pfam Helix-loop-helix DNA-binding domain 119 164 IPR011598 GO:0046983
Mibi10g0323 298 MobiDBLite consensus disorder prediction 90 113 - -
Mibi10g0323 298 Coils Coil 153 180 - -
Mibi10g0323 298 SMART finulus 120 169 IPR011598 GO:0046983
Mibi10g0323 298 Gene3D - 110 184 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0323 Mibi-ChrMibi10 5186986 5189017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0323 92 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 40.639 1.22e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi10g0323 HLH 3.4e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1693 12 33082703 33084087 Mibi10g0323 10 5186986 5189017 CCT
Mibi10g0323 10 5186986 5189017 Mibi10g0323 10 5186986 5189017 ECH