Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0322 ATGGAAATTGCCTCAGCCATATACAATATGCCTGAATTTGTATCATCATCTAATGAATTTGATGATTATCAGGGTATGGAGTATACCACGTCATATGAGGAGTTACCTATGGATTATTTTGATGGTCTTGATTTCCAGTCCTTTGTCTCCAATTCCTCTTATCATAATCCTCAGTCGATTATTGAGCCACAAGCACCAAGACCAAGCAAGATGATGCAGGTGAAGACTAACAAGTCTTCTACTGCTTCTAGATTTGTTTCTTTTGAGCAGTACTCCAATAATGGTAATAATACCCAACAATTTTACAACACGGGTTCCAATTTGATCAAGCTCGAAACCCCTAATGAAGAAAATGTAATGAATTTTGCATCTATAAATGAGAAAATGATGATGAACATGGCCATGACCGGTACCGTGACAAGAAACCCGATCCAAGCTCAGGATCACGTCATGGCTGAAAGAAGACGAAGAGAAAAGCTCAACCAGAAGTTCATTGCTCTCTCTTCCATCATTCCAGGCCTCAAGAAGATGGACAAGGCGTCAGTGTTGGGAGATGCTGTAGAATACGTGAAACAACTGAAGGAACGTGAGAAGATTCTGGAAGAACAAGTGGCCATGAAAGGAAAGGAATCGGCAGTGTTAACAAGAAGGTCTAATCTCTTTGTCGGTGACAATGAAAACTCGTCGTCCGGTGAAATTTCCGAGCAGGAGGCATTAGCAGAAATGGAAGCCAGGGTTTTGGGTAAAGAAGTTCTCATTAGAATTCAATGCGACAAACAGAGCGGGTGTGAAGCTAAAATCTTGAGAGAATTAGAAAACCTTCGTCTCACTGTTAAAAGTAGTAGCATCTTACCATTTGGTGAAACCACTCTCTGTATAACTATCATAGCTCAGATGGAGAAGGAGAACAGTATGACAGCAAAGGATTTAGTGGGAAGTTTGAGGAAGGCATTGACATTATACGATGAGTAG 972 0.4074 MEIASAIYNMPEFVSSSNEFDDYQGMEYTTSYEELPMDYFDGLDFQSFVSNSSYHNPQSIIEPQAPRPSKMMQVKTNKSSTASRFVSFEQYSNNGNNTQQFYNTGSNLIKLETPNEENVMNFASINEKMMMNMAMTGTVTRNPIQAQDHVMAERRRREKLNQKFIALSSIIPGLKKMDKASVLGDAVEYVKQLKEREKILEEQVAMKGKESAVLTRRSNLFVGDNENSSSGEISEQEALAEMEARVLGKEVLIRIQCDKQSGCEAKILRELENLRLTVKSSSILPFGETTLCITIIAQMEKENSMTAKDLVGSLRKALTLYDE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0322 323 Gene3D - 141 205 IPR036638 GO:0046983
Mibi10g0322 323 Pfam Helix-loop-helix DNA-binding domain 147 194 IPR011598 GO:0046983
Mibi10g0322 323 PANTHER BHLH TRANSCRIPTION FACTOR 40 318 - -
Mibi10g0322 323 Coils Coil 190 210 - -
Mibi10g0322 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Mibi10g0322 323 SMART finulus 150 199 IPR011598 GO:0046983
Mibi10g0322 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 217 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0322 Mibi-ChrMibi10 5126593 5128146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0322 52 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.441 1.29e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi10g0322 HLH 6.4e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0322 10 5126593 5128146 Mibi10g0322 10 5126593 5128146 ECH