Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0319 ATGAGGTTTCTCCCCTTCCTCTTCCTCCTCCTTCTCCTTCATCTCTCTTCCTCTGCCCCCATAATGTCTGAATACAGAGCCCTTCTCTCCCTCAAATCCTCCATCTTTTCCGACCCTCATTCCTCTCTCTCCTCCTGGAACTCCTCCACTAGTCACTGCACTTGGTCCTTCGTCACCTGTGATTCTCGCCGCCACGTCATCTCCCTCAACTTAACAAGCCTTTCCCTCTCTGGTTCTCTCTCCAACGACATAGCCCACCTCCCATTTCTCCAAAACCTCTCTGTAGCTGATAATCAGCTCTCAGGTCCCATCCCACCTGGCATTTCTGTTGTCTCTAACCTCCGTTTCCTCAATCTTTCAAATAATGTCTTTAATGGGACCTTCCCTGCTCAGCTTTCCCAACTCAAGAATCTCCAAAGTCTTGATCTTTATAACAATAACATGACCGGTGAGCTTCCTGTTGTTGTTACCCAGATGGTGAATCTTCGCCATTTGCATCTTGGTGGGAATTTCTTTGCGGGTCAGATCCCCAAGGAGTATGGTATGTGGGAGCATTTGGAGTATTTGGCTGTTTCTGGTAATGAACTTGATGGTACTATTCCGGCTGAGATTGGGAATTTGACTAAGCTTAAGGAGCTTTATATTGGGTATTATAATGCTTATGAGGGTGGTTTGCCACCTGAGATTGGTAACTTGTCGGAGTTAGTGAGGTTTGATGCAGCGAACTGTGGATTAACAGGTGAGATTCCCAAGGAAATTGGGAGGCTTCAGAAGCTTGATACTTTGTTCCTTCAGGTGAATGCGCTTTCTGGGGGTCTTACTCCTGAGCTTGGGAGCTTGAAGAGTTTGAAATCTATGGATTTGTCTAACAATATGCTTGCTGGTGAGATTCCGGGGAGTTTTGCTGAGCTGAAGAACTTGACTCTTATGAATTTGTTTAGGAATAAGCTTCATGGGGCTATTCCTGAGTTCATTGGTGAGCTGCCTTCTTTGGAGGTGTTGCAGCTTTGGGAGAATAACTTCACTGGGAGTATTCCTCAGGGTTTGGGGCAGAATGGGAGGCTTGTTCTTGTTGATCTTTCGTCTAATAAGATAACTGGTTATTTGCCTCCTAATTTGTGCAATGGGAATCGTCTTCAGACTCTGATAACTCTTGGGAATTTCTTGTTTGGTCCTATACCTGAATCACTTGGGAAGTGTGAAGCTTTAACAAGAATTCGTATGGGAGAGAACTATTTGAATGGTTCGATTCCTAAAGGCCTCTTTGGGCTACCCAAGCTTTCTCAGGTGGAGCTTCAGGACAATCTTCTCTCAGGGCAATTTCCTGAGGGTGCTTCCTTTTCCGCTAATCTTGGTCAGATTAGTTTATCCAACAACAAGCTTTCTGGGCCATTGCCACCTTCTATAGGTAACTTTTCTGGCATGCAAAAGCTCCTTCTTGATGGCAACAAATTCTCAGGTCAAATTCCTCCTCAGATTGGGAGATTACAGCAGCTTTCTAAGGTTGATTTTAGTCACAACAAGTTCTCTGGACCTATCGCCCCAGAAATCAGTAAATGCAAGTTACTGACGTTTGTTGATCTTAGCCGTAATGAGCTTTCTGGTGAGATTCCAAACGAATTAACTGGTATGAGGATTCTTAATTACTTGAATCTCTCTAGAAATCACCTTGTTGGTAGCATTCCATCATCGATATCAACCATGCAAAGTTTAACCTCTGTTGATTTTTCATATAACAATCTCTCTGGTTTGGTTCCTGGCACTGGACAATTCAGTTACTTCAACTACACATCTTTCCTTGGCAACCCTGAACTCTGTGGTCCTTATTTGGGTCCTTGCAAGGATGGTGTTGCTAATGGTGCTCACCCACCTCATGTTAAGGGTCCATTGTCTTCTTCCCTGAAGCTTCTCCTGGTCCTTGGGTTGCTATTATGCTCGATTGCATTTGCTGTTGCAGCAATAATCAAAGCACGATCATTGAAGAAGGCAAGTGAAGCTCGTGCATGGAAGTTAACAGCATTCCAGCGCTTGGACTTCACTGTGGATGATGTTTTGGATTGCTTGAAGGAGGACAATATAATTGGCAAAGGAGGTGCAGGAATTGTGTACAAGGGTGCCATGCCTAATGGTGATCAAGTTGCTGTGAAGAGGTTGCCTGCCATGAGTAGAGGATCTTCCCATGATCATGGTTTCAATGCTGAGATCCAGACATTGGGGAGAATCCGACACAGACACATTGTTAGGTTGTTGGGATTCTGTTCAAACCATGAAACCAATCTTTTGGTGTATGAATATATGCCCAATGGAAGCCTAGGTGAAGTTCTTCATGGTAAGAAAGGTGGTCATTTGCATTGGGACACAAGGTATAAAATTGCTGTGGAGGCTGCAAAGGGGCTGTGTTATCTACACCATGACTGTTCCCCTCTTATTGTCCATCGAGATGTGAAGTCCAACAATATCCTTCTTGACTCCAACTTGGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCCGGTTCATATGGATACATAGCACCAGAATATGCCTACACACTGAAAGTTGATGAGAAAAGCGATGTGTACAGTTTTGGGGTGGTTCTTCTAGAGCTTATAACAGGGAGGAAACCAGTTGGGGAATTTGGTGATGGTGTGGACATAGTGCAATGGGTGAGGAAGATGACTGACTCAAACAAGGAAGGAGTTCTGAAAGTTCTTGACCCAAGACTTCCCTCAGTTCCACTTCATGAGGTGATGCATGTGTTCTATGTGGCAATGCTTTGTGTGGAAGAACAAGCAGTAGAAAGACCAACCATGCGTGAAGTTGTTCAAATTCTAACAGAGCTTCCAAAGCCACCTACTTCTAAACAGGGAGACTTGGCAATCACAGAGTCATCTCTCTCTTCAACAAACCCTCTGGATTCTCCAAAAGCAGAAGTGAAAGATCATCAACAGCAGCATCCTCCTCAATCACCACCACCAGATCTTCTTAGCATTTGA 3039 0.4436 MRFLPFLFLLLLLHLSSSAPIMSEYRALLSLKSSIFSDPHSSLSSWNSSTSHCTWSFVTCDSRRHVISLNLTSLSLSGSLSNDIAHLPFLQNLSVADNQLSGPIPPGISVVSNLRFLNLSNNVFNGTFPAQLSQLKNLQSLDLYNNNMTGELPVVVTQMVNLRHLHLGGNFFAGQIPKEYGMWEHLEYLAVSGNELDGTIPAEIGNLTKLKELYIGYYNAYEGGLPPEIGNLSELVRFDAANCGLTGEIPKEIGRLQKLDTLFLQVNALSGGLTPELGSLKSLKSMDLSNNMLAGEIPGSFAELKNLTLMNLFRNKLHGAIPEFIGELPSLEVLQLWENNFTGSIPQGLGQNGRLVLVDLSSNKITGYLPPNLCNGNRLQTLITLGNFLFGPIPESLGKCEALTRIRMGENYLNGSIPKGLFGLPKLSQVELQDNLLSGQFPEGASFSANLGQISLSNNKLSGPLPPSIGNFSGMQKLLLDGNKFSGQIPPQIGRLQQLSKVDFSHNKFSGPIAPEISKCKLLTFVDLSRNELSGEIPNELTGMRILNYLNLSRNHLVGSIPSSISTMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGAHPPHVKGPLSSSLKLLLVLGLLLCSIAFAVAAIIKARSLKKASEARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNLEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPTSKQGDLAITESSLSSTNPLDSPKAEVKDHQQQHPPQSPPPDLLSI 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0319 1012 Gene3D Phosphorylase Kinase; domain 1 653 765 - -
Mibi10g0319 1012 SUPERFAMILY L domain-like 352 613 - -
Mibi10g0319 1012 Pfam Protein tyrosine and serine/threonine kinase 690 959 IPR001245 GO:0004672|GO:0006468
Mibi10g0319 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 81 324 - -
Mibi10g0319 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 332 617 - -
Mibi10g0319 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 766 976 - -
Mibi10g0319 1012 Gene3D Ribonuclease Inhibitor 77 352 IPR032675 -
Mibi10g0319 1012 MobiDBLite consensus disorder prediction 971 988 - -
Mibi10g0319 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Mibi10g0319 1012 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 228 961 - -
Mibi10g0319 1012 SMART serkin_6 688 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0319 1012 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Mibi10g0319 1012 SMART LRR_typ_2 424 448 IPR003591 -
Mibi10g0319 1012 SMART LRR_typ_2 87 111 IPR003591 -
Mibi10g0319 1012 SMART LRR_typ_2 135 159 IPR003591 -
Mibi10g0319 1012 SMART LRR_typ_2 280 303 IPR003591 -
Mibi10g0319 1012 SMART LRR_typ_2 568 591 IPR003591 -
Mibi10g0319 1012 SMART LRR_typ_2 328 352 IPR003591 -
Mibi10g0319 1012 Pfam Leucine rich repeat 112 170 IPR001611 GO:0005515
Mibi10g0319 1012 Gene3D Transferase(Phosphotransferase) domain 1 766 977 - -
Mibi10g0319 1012 SUPERFAMILY RNI-like 68 390 - -
Mibi10g0319 1012 SUPERFAMILY Protein kinase-like (PK-like) 681 959 IPR011009 -
Mibi10g0319 1012 ProSiteProfiles Protein kinase domain profile. 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0319 1012 Gene3D Ribonuclease Inhibitor 353 617 IPR032675 -
Mibi10g0319 1012 Gene3D Ribonuclease Inhibitor 14 76 IPR032675 -
Mibi10g0319 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 657 765 - -
Mibi10g0319 1012 MobiDBLite consensus disorder prediction 963 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0319 Mibi-ChrMibi10 5040735 5044253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0319 15 1012 Receptor kinase-like Gene Family AT5G65700 80.857 0.0 1611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi10g0319 PK_Tyr_Ser-Thr 7.8e-47 CL0016