Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0318 ATGATCAACGCCTCTCTCTCTCTCTCTCTCTGTGGGATTTTCTCTTTTCACTCACCCCATAAGCACCTGATTCAGTCTTCTCATTTGCAGCTACCAGACATGGAATTTCTAGCTTTCAGACATCTTCCCTTTTTCCTACTATACTCTCTACTCTTCTTCTGTCATATCTCATCACAAGCTTCTTCTTCATTCACCGATTCTGACATTCTTCTTCGAGTAAAGACAACCCAGATCATTGATGAGAACAATAGCCTCAAAAATTGGGACAAATCCTTCACTCCCTGCAACTGGGTTGGCATAACCTGTGATCACCTCAACCATTCCATTATCTCCATTGACCTCTCAGGTACCGGCATTAATGGCGGGTTTCCGTACGGTTTTTGTCGTATTCGCACTCTGAGAAACCTCTCTGTTGCACAAAACTATCTGGGTGGTTTTCTCTCTCCTCAATCTCTCCTTCTCTGTTCTCAAATTCGTGTCTTGAACATCTCTGACAATTTATTCGTCGGCTTATTGCCGGAATTCTCGTCGGAGTTTTCTGAACTGAGAATCCTTGATTTCTCGCTTAACAACTTCACCGGCGAGATCCCAGCGAGTTTTGGACGGTTCCCACATCTTAAAGTTCTCATCTTGTCTTCCAATTTGCTCAATGGGACCATTCCCGAGTTCTTGGGGAATCTCAGTGAGTTGACTCGGTTGGAACTCGCTTATAACCCCTTCAAGCCAGGACCTTTACCTTTTCAACTTGGGGATTTAATGAAGCTTGAAGTTATGTTTCTTGCTAGTACAAATGTTGAAGGTGAAATTCCAGACTCTATAGGGAGGTTGGTTTCTCTGAAGAACTTGGATTTGTCACAAAATTTGTTGTCAGGTGAAATCCCAGGTAGCATTTCGGGTTTGAGAAGTGTGGAACAGATTGTGCTGTTTCTAAACCAACTTTCAGGTGAGATTCCTCGTGGTTTGGGAAATCTTACTAGTTTGATTAGTTTAGATCTCTCTCAGAATAATCTCACAGGGAAATTGCCTGATTCTGTTACTGCCTTGCGTCTTCAATCTCTGTCACTGAATGATAATTTCCTCCAAGGAGAAATCCCTGGGAATGTCGCTAATAATCCAAATTTACTGAGATTGATTCTGTTTAATAACAGCTTCACTGGGAAATTACCTGAAGATCTTGGTCGAAATTCTGATTTACAGGAGCTTGATGTTTCTACCAATGACTTAATTGGTGAATTGCCTAAGTACCTTTGTGAAAGGAGAAAGTTGCAACGACTTGTCACATTCAGGAATCGATTTTCTGGAAATCTTCCTGAGAAGTATGGTGAGTGTCATTCACTTTACTATGTCAGAATAGAGTATAACCAGCTATCTGGTGAGGTGCCCCCACAATTCTGGCAACTTCCTGTACTTGAAATTTTAAAAATGAATGACAACTTGTTGGAGGGTTCAGTCTCCATATCTGGTAGAGGTCAGAGACTCTCCGTTCTTCAAATATCTGGTAACAGGTTTTCTGGACATTTAGCTGCAGAAATCTGTGAGGTCCACAATATTAGAGAGATTGATATTAGCCGGAACATGTTTACTGGTGAAGTTCCGTCATGTATAACTGGATTAAAGATGTTACAGAAGCTGAGCATGCAAGAGAACATGTTCTTTGGCGTGATTCCTAGTAATGTGAACTCCTGGACTGAATTGACCTTATTGAACTTGTCATATAACCGATTATCTGGTTTGATTCCGCCTGAGCTTGGGAATTTGCCAGATTTGAGTTCTCTTGATCTAGCCATGAATTTCCTGAGTGGGGGAATTCCGCCAGAGTTAGCTAAACTCAAGCTCAGCCAGTTCAACTTGTCAGGAAACAAGTTGTCTGGAAATGTGCCTTCAGGGTTCAACAATGAATTCTATTTGTCAGGTCTGGTTGGTAATCCGAACCTCTGTAGTGAATTCAGGAAATCCCTTCATCCTTGTTCGAAATCCAAGCACTTCTCTTCATTAGCTATTATTGTGTTATCTACCTTAATTGTACTCCTTCTGGGGTTTCTCCTCTTGTTCCTCAAGAGCAGGAAGTCATTGTTTTTAACTGGCAAATCCAAGCAATCTTTTAGGACAACAACATTCCATATGGTGGGGTTTAAGGAAGAAGATGTTATTTCATTGCTAAACCCTGAGAATCTAATTGGTACTGGGAGTTCAGGTCAGGTCTATAGGGTGCAGCTCAAGACAGGAGAGACAGTTGCTGTGAAGAAGATGTGGGAAGGACGTTCAGGGAAACAGAATCCAGATTCAGTTTTCAAATCGGAGATTGAGATACTAGGTAGAATTCGCCATGTTGATATAGTAAAATTGCTATATAGCTGCTGTGCCGATGATTTACAGATTCTGGTGTATGAGTATTTGGAGAATGGCAGCCTGAGTGATGTTCTGCATGGTGAAAAGTCCGGTGAGTTGATGGATTGGTCCAGGCGGTTCAACATAGCAGTAGGTGCAGCTAGGGGACTGGCTTATTTACACCATGATTGTGTTCCACCTATAGTTCACAGAGATGTGAAGAGTAGTAACATATTGCTGGATCACGATTTCAAACCTCGTGTTGCGGATTTTGGTTTGGCCAAGATCTTGCAGCCAAAGGCAGATGAAAATGGTGGTAATGCTACGTCCTGGGTTGCTGGCTCTTATGGTTACATTGCTCCAGAATATGCTTACACACTTAAAGTAACCGAGAAAAGTGATGTATATAGCTATGGTGTACTATTGATGGAATTGATCACAGGGAGGAGGCCAAATGACCCATCCTTTGGTGAGAATAGGGACATAGTGAAGTGGCTTACTGAGACTGCTTTGTCAAGTTCTTCTACAGGAGGGAGTGGCAATAATATGGAAGGCCATAACCATGACCTGGTTCAGATTGTGGACCCTAAGTTGAACCCCTCCACGTGTGATTATGAAGAGATTGAGAGGGTATTGAATGTGGCCCTGCTTTGTACCTCAACTTTCCCCATGAATAGACCCTCAATGAGAAGGGTGGTGGACTTGCTCAAAGAACATAAGACTTGTCCCAAGTCATGA 3066 0.4227 MINASLSLSLCGIFSFHSPHKHLIQSSHLQLPDMEFLAFRHLPFFLLYSLLFFCHISSQASSSFTDSDILLRVKTTQIIDENNSLKNWDKSFTPCNWVGITCDHLNHSIISIDLSGTGINGGFPYGFCRIRTLRNLSVAQNYLGGFLSPQSLLLCSQIRVLNISDNLFVGLLPEFSSEFSELRILDFSLNNFTGEIPASFGRFPHLKVLILSSNLLNGTIPEFLGNLSELTRLELAYNPFKPGPLPFQLGDLMKLEVMFLASTNVEGEIPDSIGRLVSLKNLDLSQNLLSGEIPGSISGLRSVEQIVLFLNQLSGEIPRGLGNLTSLISLDLSQNNLTGKLPDSVTALRLQSLSLNDNFLQGEIPGNVANNPNLLRLILFNNSFTGKLPEDLGRNSDLQELDVSTNDLIGELPKYLCERRKLQRLVTFRNRFSGNLPEKYGECHSLYYVRIEYNQLSGEVPPQFWQLPVLEILKMNDNLLEGSVSISGRGQRLSVLQISGNRFSGHLAAEICEVHNIREIDISRNMFTGEVPSCITGLKMLQKLSMQENMFFGVIPSNVNSWTELTLLNLSYNRLSGLIPPELGNLPDLSSLDLAMNFLSGGIPPELAKLKLSQFNLSGNKLSGNVPSGFNNEFYLSGLVGNPNLCSEFRKSLHPCSKSKHFSSLAIIVLSTLIVLLLGFLLLFLKSRKSLFLTGKSKQSFRTTTFHMVGFKEEDVISLLNPENLIGTGSSGQVYRVQLKTGETVAVKKMWEGRSGKQNPDSVFKSEIEILGRIRHVDIVKLLYSCCADDLQILVYEYLENGSLSDVLHGEKSGELMDWSRRFNIAVGAARGLAYLHHDCVPPIVHRDVKSSNILLDHDFKPRVADFGLAKILQPKADENGGNATSWVAGSYGYIAPEYAYTLKVTEKSDVYSYGVLLMELITGRRPNDPSFGENRDIVKWLTETALSSSSTGGSGNNMEGHNHDLVQIVDPKLNPSTCDYEEIERVLNVALLCTSTFPMNRPSMRRVVDLLKEHKTCPKS 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0318 1021 FunFam Leucine-rich repeat receptor-like protein kinase TDR 349 658 - -
Mibi10g0318 1021 Pfam Leucine rich repeat N-terminal domain 66 103 IPR013210 -
Mibi10g0318 1021 Gene3D Ribonuclease Inhibitor 220 321 IPR032675 -
Mibi10g0318 1021 Gene3D Ribonuclease Inhibitor 63 219 IPR032675 -
Mibi10g0318 1021 ProSitePatterns Protein kinases ATP-binding region signature. 726 749 IPR017441 GO:0005524
Mibi10g0318 1021 SUPERFAMILY Protein kinase-like (PK-like) 716 1012 IPR011009 -
Mibi10g0318 1021 SMART serkin_6 720 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0318 1021 SUPERFAMILY RNI-like 308 636 - -
Mibi10g0318 1021 Gene3D Phosphorylase Kinase; domain 1 697 798 - -
Mibi10g0318 1021 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 799 1021 - -
Mibi10g0318 1021 Gene3D Transferase(Phosphotransferase) domain 1 799 1020 - -
Mibi10g0318 1021 SUPERFAMILY L domain-like 64 345 - -
Mibi10g0318 1021 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 101 348 - -
Mibi10g0318 1021 Pfam Leucine Rich Repeat 326 345 IPR001611 GO:0005515
Mibi10g0318 1021 Pfam Leucine Rich Repeat 565 586 IPR001611 GO:0005515
Mibi10g0318 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Mibi10g0318 1021 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 350 1013 - -
Mibi10g0318 1021 Gene3D Ribonuclease Inhibitor 329 659 IPR032675 -
Mibi10g0318 1021 Pfam Protein kinase domain 723 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0318 1021 Pfam Leucine rich repeat 181 239 IPR001611 GO:0005515
Mibi10g0318 1021 ProSiteProfiles Protein kinase domain profile. 720 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0318 Mibi-ChrMibi10 5008917 5012076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0318 62 1017 Receptor kinase-like Gene Family AT5G65710 54.060 0.0 1010
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi10g0318 Pkinase 3.7e-44 CL0016