Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi10g0309 | ATGGCTTCTTCCTCAGACCTCCAGCTTGTTCTAGGGCTTGGTTCTGATACCATCTATAACATCACAACTCCGAAGAAGCCCTGCTCTAATCTCACCGTTACGAGTGGTGTTTGTGAGCCATCTTTGACGTTGGCTCTCTCTGCAGGCAACACTAATAATAATCATTACCTCCTTCCTAAGAAGATCGATGTGAACATCAAAGCCAGTAATTGTGAGGAAAATACAGCTCTCGATCATCTTTCTCGCCAGACATCTTCGCCTCATAGCGTGGTCTCCTCCTTCTCTGGTGGGAGGGTGAAGAGGGAAAGAGATCTCAGCAGCAGCGAGATGGAGGCTGAGGCTGAGAGGCTATCTTCAAGAATCAGCGATGAAGATTATGAAGACGGCACTAATGCCAGAAAGAAACTCAGACTCACCAAAGAACAATCCGCCCTCCTCGAAGAAAGCTTCAAACAACACAGCACACTCAACCCTAAGCAAAAGCAGGCCTTGGCAAGACAGTTAAATCTACGTCCTCGCCAGGTTGAAGTTTGGTTCCAAAATAGAAGAGCCAGGACGAAGCTGAAGCAGACGGAGGTGGACTGTGAGTTTTTGAAGAAGTGTTGTGAGACACTGACGGATGAGAACAGGAGGCTGCAGAAGGAGGTGCAGGAGCTGAAGGCTTTGAAGATATCTTCTCATCAGCCGTTGTATGTGCCGATGCCGGCGGCGACTCTCACCATGTGCCCGTCCTGCGAGCGGCTCGGCGGCGTCGACGGTGGAGGTTCAAATGCTATTATTAATAATAATAACAATAATAATAATAAGATGTCATTCTCCATGACCCCTAAGGCCACTCACCACCACCTCTTCAACCCCTTCACCAATCCTTCTGCGGCATGTTAA | 885 | 0.4847 | MASSSDLQLVLGLGSDTIYNITTPKKPCSNLTVTSGVCEPSLTLALSAGNTNNNHYLLPKKIDVNIKASNCEENTALDHLSRQTSSPHSVVSSFSGGRVKRERDLSSSEMEAEAERLSSRISDEDYEDGTNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKEVQELKALKISSHQPLYVPMPAATLTMCPSCERLGGVDGGGSNAIINNNNNNNNKMSFSMTPKATHHHLFNPFTNPSAAC | 294 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi10g0309 | 294 | FunFam | Homeobox-leucine zipper protein 18 | 118 | 194 | - | - | |
Mibi10g0309 | 294 | Pfam | Homeodomain | 133 | 187 | IPR001356 | GO:0003677 | |
Mibi10g0309 | 294 | Coils | Coil | 195 | 225 | - | - | |
Mibi10g0309 | 294 | CDD | homeodomain | 133 | 190 | IPR001356 | GO:0003677 | |
Mibi10g0309 | 294 | MobiDBLite | consensus disorder prediction | 97 | 128 | - | - | |
Mibi10g0309 | 294 | SMART | halz | 189 | 234 | IPR003106 | GO:0006355|GO:0043565 | |
Mibi10g0309 | 294 | Pfam | Homeobox associated leucine zipper | 189 | 222 | IPR003106 | GO:0006355|GO:0043565 | |
Mibi10g0309 | 294 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 48 | 277 | - | - | |
Mibi10g0309 | 294 | SMART | HOX_1 | 131 | 193 | IPR001356 | GO:0003677 | |
Mibi10g0309 | 294 | MobiDBLite | consensus disorder prediction | 79 | 128 | - | - | |
Mibi10g0309 | 294 | ProSiteProfiles | 'Homeobox' domain profile. | 129 | 189 | IPR001356 | GO:0003677 | |
Mibi10g0309 | 294 | Gene3D | - | 137 | 187 | - | - | |
Mibi10g0309 | 294 | SUPERFAMILY | Homeodomain-like | 122 | 190 | IPR009057 | - | |
Mibi10g0309 | 294 | ProSitePatterns | 'Homeobox' domain signature. | 164 | 187 | IPR017970 | GO:0000981|GO:0006355 | |
Mibi10g0309 | 294 | MobiDBLite | consensus disorder prediction | 79 | 93 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi10g0309 | Mibi-ChrMibi10 | 4907660 | 4908950 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi10g0309 | 9 | 294 | Homeobox Transcription Factor Family | AT4G37790 | 56.949 | 2.99e-86 | 258 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Mibi10g0309 | Homeodomain | 1.9e-16 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mibi12g1702 | 12 | 33173316 | 33174484 | Mibi10g0309 | 10 | 4907660 | 4908950 | CCT |