Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0309 ATGGCTTCTTCCTCAGACCTCCAGCTTGTTCTAGGGCTTGGTTCTGATACCATCTATAACATCACAACTCCGAAGAAGCCCTGCTCTAATCTCACCGTTACGAGTGGTGTTTGTGAGCCATCTTTGACGTTGGCTCTCTCTGCAGGCAACACTAATAATAATCATTACCTCCTTCCTAAGAAGATCGATGTGAACATCAAAGCCAGTAATTGTGAGGAAAATACAGCTCTCGATCATCTTTCTCGCCAGACATCTTCGCCTCATAGCGTGGTCTCCTCCTTCTCTGGTGGGAGGGTGAAGAGGGAAAGAGATCTCAGCAGCAGCGAGATGGAGGCTGAGGCTGAGAGGCTATCTTCAAGAATCAGCGATGAAGATTATGAAGACGGCACTAATGCCAGAAAGAAACTCAGACTCACCAAAGAACAATCCGCCCTCCTCGAAGAAAGCTTCAAACAACACAGCACACTCAACCCTAAGCAAAAGCAGGCCTTGGCAAGACAGTTAAATCTACGTCCTCGCCAGGTTGAAGTTTGGTTCCAAAATAGAAGAGCCAGGACGAAGCTGAAGCAGACGGAGGTGGACTGTGAGTTTTTGAAGAAGTGTTGTGAGACACTGACGGATGAGAACAGGAGGCTGCAGAAGGAGGTGCAGGAGCTGAAGGCTTTGAAGATATCTTCTCATCAGCCGTTGTATGTGCCGATGCCGGCGGCGACTCTCACCATGTGCCCGTCCTGCGAGCGGCTCGGCGGCGTCGACGGTGGAGGTTCAAATGCTATTATTAATAATAATAACAATAATAATAATAAGATGTCATTCTCCATGACCCCTAAGGCCACTCACCACCACCTCTTCAACCCCTTCACCAATCCTTCTGCGGCATGTTAA 885 0.4847 MASSSDLQLVLGLGSDTIYNITTPKKPCSNLTVTSGVCEPSLTLALSAGNTNNNHYLLPKKIDVNIKASNCEENTALDHLSRQTSSPHSVVSSFSGGRVKRERDLSSSEMEAEAERLSSRISDEDYEDGTNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKEVQELKALKISSHQPLYVPMPAATLTMCPSCERLGGVDGGGSNAIINNNNNNNNKMSFSMTPKATHHHLFNPFTNPSAAC 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0309 294 FunFam Homeobox-leucine zipper protein 18 118 194 - -
Mibi10g0309 294 Pfam Homeodomain 133 187 IPR001356 GO:0003677
Mibi10g0309 294 Coils Coil 195 225 - -
Mibi10g0309 294 CDD homeodomain 133 190 IPR001356 GO:0003677
Mibi10g0309 294 MobiDBLite consensus disorder prediction 97 128 - -
Mibi10g0309 294 SMART halz 189 234 IPR003106 GO:0006355|GO:0043565
Mibi10g0309 294 Pfam Homeobox associated leucine zipper 189 222 IPR003106 GO:0006355|GO:0043565
Mibi10g0309 294 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 48 277 - -
Mibi10g0309 294 SMART HOX_1 131 193 IPR001356 GO:0003677
Mibi10g0309 294 MobiDBLite consensus disorder prediction 79 128 - -
Mibi10g0309 294 ProSiteProfiles 'Homeobox' domain profile. 129 189 IPR001356 GO:0003677
Mibi10g0309 294 Gene3D - 137 187 - -
Mibi10g0309 294 SUPERFAMILY Homeodomain-like 122 190 IPR009057 -
Mibi10g0309 294 ProSitePatterns 'Homeobox' domain signature. 164 187 IPR017970 GO:0000981|GO:0006355
Mibi10g0309 294 MobiDBLite consensus disorder prediction 79 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0309 Mibi-ChrMibi10 4907660 4908950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0309 9 294 Homeobox Transcription Factor Family AT4G37790 56.949 2.99e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi10g0309 Homeodomain 1.9e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1702 12 33173316 33174484 Mibi10g0309 10 4907660 4908950 CCT