Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0305 ATGGGGAGGGCTCCTTGCTGTGACAAAGCCAACGTGAAGAAAGGGCCATGGTCGCCGGAGGAAGACACCAAACTCAAAGCTTACATAGAACAGAACGGCACCGGCGGCAACTGGATAGCACTTCCTCACAAGATAGGGCTTAAGAGATGTGGGAAAAGCTGTCGTTTGAGATGGTTGAATTATCTTCGCCCCAACATCAAGCATGGTGGTTTCTCAGAAGAAGAAGACAACATAATTTGCAGCCTCTATGTTAGTATTGGAAGCAGGTGGTCTATAATAGCGGCGCAATTACCAGGAAGAACAGACAATGATATTAAGAACTACTGGAACACAAGGCTGAAGAAGAAACTTCTTGGGAAACAGCGTAAGCAACAAGAAGCTCAAGCTCGGAGACCAAATAATAGCACCATCAAGCAAGAACTTATTAAGAACCAAACTATCACTCCCTCTTTGTCTCATGATCATCATAATCAACTCCCTCAATACCCATTATCATCATATGAACCTGATCCTTCCTTCTTCTTATTCCCACAAGACCATCACCTATATCCAAATGATGGTTTGACCCAGATGGGCTCAAACAGTGTATTTGAAGGATTTCAAGTTCAAAACTTTCAGGTGACTAGTAATGATTTGAGCCATCAGACCATGGGATGTAATGGGTTATTTCAGAGTTACGGTGGAGGCGGAGTAATGGAGTCGTCGTTGTCGTCGTCCACGGCTACTACTTCGACGGAAAGTAGTACAAGTTGGGCAGACATGAGCTCTTTGCTTAATTACTCTCCCAACAATATGGTTTCCGATCAGTACCAAGAAATAATGTTGCCTCATCAACAATATGTTACCCCTTTTGAGGACCCTTCCTACTTTGGATATGTGCAATAA 885 0.435 MGRAPCCDKANVKKGPWSPEEDTKLKAYIEQNGTGGNWIALPHKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKQRKQQEAQARRPNNSTIKQELIKNQTITPSLSHDHHNQLPQYPLSSYEPDPSFFLFPQDHHLYPNDGLTQMGSNSVFEGFQVQNFQVTSNDLSHQTMGCNGLFQSYGGGGVMESSLSSSTATTSTESSTSWADMSSLLNYSPNNMVSDQYQEIMLPHQQYVTPFEDPSYFGYVQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0305 294 CDD SANT 71 113 IPR001005 -
Mibi10g0305 294 Gene3D - 7 68 - -
Mibi10g0305 294 MobiDBLite consensus disorder prediction 119 139 - -
Mibi10g0305 294 CDD SANT 16 62 IPR001005 -
Mibi10g0305 294 FunFam Transcription factor RAX3 7 68 - -
Mibi10g0305 294 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mibi10g0305 294 PANTHER OS09G0431300 PROTEIN 1 255 - -
Mibi10g0305 294 Gene3D - 70 146 - -
Mibi10g0305 294 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mibi10g0305 294 SMART sant 67 115 IPR001005 -
Mibi10g0305 294 SMART sant 13 64 IPR001005 -
Mibi10g0305 294 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi10g0305 294 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mibi10g0305 294 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mibi10g0305 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mibi10g0305 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mibi10g0305 294 FunFam Transcription factor RAX3 70 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0305 Mibi-ChrMibi10 4831439 4832584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0305 1 142 MYB Transcription Factor Family AT5G65790 83.916 1.05e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi10g0305 Myb_DNA-binding 3.3e-13 CL0123