Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0299 ATGTCTTCAATCAGAATATCTGAAACTGAAACTCACCATTTCCTCCCTCCGGTCGATTTTGGCGATGATCACCGTATTCTGTCGCCGGAGAATCTGAGTCCACCACCGTCTCCGCCTCCAGGAATCAGTGAAATCTCAGGGCTTGAAAAAGAAAAAGACGAAGATCATAATCGTGGAGTAATTAGGAAAATGGAAGTAACGGATGCGATTACGAGAGATAAAACGATTTGTCCGATTTGCAAGGATGAGTTCAAATTGGGAGAAATTGCAGGAGAATTAGGTTGCGAACATTACTTTTGCTTTGAATGTATTCATGGTTGGCTCAATTTCAACGGTAACGATTCTTGTCCTGTTTGTCGTCGTCGATTTCTTTCACCTGAAACCGCACGATATGCACGTATACTGAATCGTTGGCCATTATATTCTCGTCGTCGTCGCCGTGGATTGCTTCTCCGTTTTGCTAATGAAGAAACTGATTCGTCACCTTCTCAACCATTAATGAACAATGATGGTGAAGCTGGTTATGACATTGCACTTGACGAACTTGAATCTGGAAGTGGATCAACAAATTCATGA 576 0.4236 MSSIRISETETHHFLPPVDFGDDHRILSPENLSPPPSPPPGISEISGLEKEKDEDHNRGVIRKMEVTDAITRDKTICPICKDEFKLGEIAGELGCEHYFCFECIHGWLNFNGNDSCPVCRRRFLSPETARYARILNRWPLYSRRRRRGLLLRFANEETDSSPSQPLMNNDGEAGYDIALDELESGSGSTNS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0299 191 PANTHER TARGET OF ERK KINASE MPK-1 48 127 - -
Mibi10g0299 191 SMART ring_2 77 119 IPR001841 -
Mibi10g0299 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 134 IPR013083 -
Mibi10g0299 191 MobiDBLite consensus disorder prediction 14 55 - -
Mibi10g0299 191 ProSitePatterns Zinc finger RING-type signature. 95 104 IPR017907 -
Mibi10g0299 191 ProSiteProfiles Zinc finger RING-type profile. 77 120 IPR001841 -
Mibi10g0299 191 SUPERFAMILY RING/U-box 65 126 - -
Mibi10g0299 191 Pfam Ring finger domain 76 120 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0299 Mibi-ChrMibi10 4715423 4715998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0299 19 120 C3H Transcription Factor Family AT1G68180 29.412 8.16e-10 54.7