Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0297 ATGCCTCCAAGGAGAAGATGGTACCATCGCATTTGTTTATCGAGCAGTGCTGATAGTGATACTTCAGACTCATCAGAATCTGAACCTAGCGTTTTCCTTCCTCCGGCGAATTTAACCAACGGTCACGATTTTCCGTCGCCGGAGAATCTTCGCCCAGCCATTGAAGATTCCACACCTCAAGCTTTCTATGCATCAACTGAAAATGGCCGCCAACTCTTCCGACCGCCGCCTCCGCCTCCGTACATGCGAAACCATGATCAGATTCGAGAAATCAGTGAAATCTCAGGAGTTGAAGAAGAAGAACGAGATGATCATAACAGTGAAATGATTAGGAAAATGGAAGTAACGGAGGAGATCACGAGAGAGAAAACGATTTGTCCAATTTGTAAGGATGAGTTCAATTTGGGGGAAGTTGCAGGAAAATTAGGTTGCAAACATTACTTTTGCATTGAATGTATTCATGGTTGGCTCAATTTCAACGGTAACAATACTTGCCCTGTTTGTCGTCGTCCATTACCACCACATGTTAATTTTGATGATCTCCTGCCAAATTACTATGGTCGTGTGCTGAATTCTACTGATTCGCAACTTGTTGCTGATGAAGAAACTGATAGTGAAGCTGGTTATGACTCTGCACTTGATGAGCTTGAATCTGGGAGTGGATCAACAAATTCATGA 678 0.4336 MPPRRRWYHRICLSSSADSDTSDSSESEPSVFLPPANLTNGHDFPSPENLRPAIEDSTPQAFYASTENGRQLFRPPPPPPYMRNHDQIREISEISGVEEEERDDHNSEMIRKMEVTEEITREKTICPICKDEFNLGEVAGKLGCKHYFCIECIHGWLNFNGNNTCPVCRRPLPPHVNFDDLLPNYYGRVLNSTDSQLVADEETDSEAGYDSALDELESGSGSTNS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0297 225 MobiDBLite consensus disorder prediction 14 34 - -
Mibi10g0297 225 MobiDBLite consensus disorder prediction 199 225 - -
Mibi10g0297 225 ProSitePatterns Zinc finger RING-type signature. 144 153 IPR017907 -
Mibi10g0297 225 ProSiteProfiles Zinc finger RING-type profile. 126 169 IPR001841 -
Mibi10g0297 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 180 IPR013083 -
Mibi10g0297 225 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 59 173 - -
Mibi10g0297 225 SUPERFAMILY RING/U-box 112 176 - -
Mibi10g0297 225 MobiDBLite consensus disorder prediction 13 53 - -
Mibi10g0297 225 Pfam Ring finger domain 125 169 IPR001841 -
Mibi10g0297 225 SMART ring_2 126 168 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0297 Mibi-ChrMibi10 4709772 4710449 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0297 116 173 C3H Transcription Factor Family AT5G15820 48.276 3.16e-11 60.1