Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0289 ATGAGGCACATCATGTGTTACTCTTCAGGAAAATTAGTGGTAACTCTGTTTCTGATGATCTCATTATGCAGAACTTGCAAGGCTTCAGATGGAACCCAGAACTGTTCTAGTTTGTGCGGAGATCACAGAATTAGCTTCCCTTTTCGGTTAAAAGACTCTCCAGAGAAGTGTGGTTTCAAGGAGCATGAGTTATCTTGCGAGCAAAACCAACTGGTCATGTACTGGGAATCTGGGAGATACAGAGTTTTGTCCATTAATTACGACAACAGGACAATCCGAGTTAGGGACGCTAGTATTGAGGAGTTGGATTCATCTTCCCTTCTTCAGCATTCTTTAACACACCACAACTTTAGCACACCACAGTTTTCATATGCCTCCGGATATAGATTTCAAACAAACATGATAATGATATACGTAAGGTGTGAACACCCTGTGAATTCCCGAACGTTTTTGGACACAAACACTTGCTTAAAGACTTCATCATCATCATCATCACCAAATTCGTATGCCTATGCTGGGAGCGGATATGTAGGGGATGTGGGGTTAGAGGATGTTACTTCAGTAATTATGCATAGTGCAGCTAAATTTGTGTTGGGGGCTCCATTTGTCATTGCCCTTTTGATCTACAAATGGCGACGGAGACATTTATCAGTGTATGAGAGCATCGAAGATTTTCTGCAAAGCGACAACAACAGCATCATGCCTATAAGGTACTCCTACAAAGACATCAAGAAGATGACCAAAGGGTTTAAAATAAGACTTGGGAAGGGAGGCTATGGTTCCGTTTTCAAAGGAAAACTTCGAAGTGGCCATGACGTGGCTGTCAAGATGCTGGATAAGGCTGAAGCCAATGGTCAGGATTTCATCAACGAAGTTGCTACACTTGGTAGAATCCACCATGTTAATGTTGTGCATCTCATTGGTTATTGTGTGGAAGGATCAAAACGTGCTCTTATCTATGAATTCATGCAAAATGGATCTCTTGACAAATATATTCTCCCTAAAATTGATGCAAATGAGCAATCCTTGGATCTTCATCAAATGTATGCAATTTCTCTTAGTGTAGCTCGTGGTATTGAATATCTTCACAAAGGATGTGACATGCAAATTCTGCATTTTGATATAAAACCCCACAACATCCTTCTCGATGACAACTTCATCCCAAAGGTTTCTGATTTTGGCCTTGCTAAACTCTATCCTATAAATGATAGCATCGTGTCTCTTACAGCAGCAAGGGGAACTATAGGATACATGGCTCCGGAGCTCTTCTACAAAAATATAGGTGGGGTATCCTATAAAGCTGATGTCTACAGCTTTGGGATGCTATTAATGGAGATGGCTGGCAGAAGGAAGAATTTAAATGTGTTGGCTGAGCAATCAAGTCAATTTTATTTTCCTTTTTGGGCTTATGATCAACTAAATGAAGGAAATGAAATTAGCATAGCAGATGCAACAGAAGAAGAAATGAAAGTAGCAAGGAAAATGATGATTGTTGCCTTGTGGTGCATTCAAACCAAGCCTAGCGATCGTCCTTCAATGAACAAAGTTGTGGAGATGCTTGAAGGAGATGAGAAGGACTTAGAATTGCCTCAGAAGCCTTATCTATATCCACAGGATTTACCAGCAATTGATGATAATAACAATCATTCAAGTTCAACACAGCGATCCAAGTCAAGCAGTCATTCTTCAATGAACAAAGCTGTGGAGATACTTGAAGGAGTGGAGAAAGAGATAGTATTGCCTCACAAGCCTTTTCCATTCACACAAGATTCACCAACAGTTGATGTTAGTGATCATTTATGTTCAACTCCTTCATCCTCTGATCCTACAATGAAGAATTATAGAGAAACAAGCTCATTGTTAACTAAACAAGATGAGAGATCAATATAA 1890 0.3989 MRHIMCYSSGKLVVTLFLMISLCRTCKASDGTQNCSSLCGDHRISFPFRLKDSPEKCGFKEHELSCEQNQLVMYWESGRYRVLSINYDNRTIRVRDASIEELDSSSLLQHSLTHHNFSTPQFSYASGYRFQTNMIMIYVRCEHPVNSRTFLDTNTCLKTSSSSSSPNSYAYAGSGYVGDVGLEDVTSVIMHSAAKFVLGAPFVIALLIYKWRRRHLSVYESIEDFLQSDNNSIMPIRYSYKDIKKMTKGFKIRLGKGGYGSVFKGKLRSGHDVAVKMLDKAEANGQDFINEVATLGRIHHVNVVHLIGYCVEGSKRALIYEFMQNGSLDKYILPKIDANEQSLDLHQMYAISLSVARGIEYLHKGCDMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPINDSIVSLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGRRKNLNVLAEQSSQFYFPFWAYDQLNEGNEISIADATEEEMKVARKMMIVALWCIQTKPSDRPSMNKVVEMLEGDEKDLELPQKPYLYPQDLPAIDDNNNHSSSTQRSKSSSHSSMNKAVEILEGVEKEIVLPHKPFPFTQDSPTVDVSDHLCSTPSSSDPTMKNYRETSSLLTKQDERSI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0289 629 ProSitePatterns Protein kinases ATP-binding region signature. 254 276 IPR017441 GO:0005524
Mibi10g0289 629 MobiDBLite consensus disorder prediction 543 564 - -
Mibi10g0289 629 Gene3D Phosphorylase Kinase; domain 1 223 322 - -
Mibi10g0289 629 ProSiteProfiles Protein kinase domain profile. 248 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0289 629 FunFam serine/threonine-protein kinase PBS1-like 218 322 - -
Mibi10g0289 629 SMART serkin_6 248 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0289 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Mibi10g0289 629 MobiDBLite consensus disorder prediction 586 629 - -
Mibi10g0289 629 SUPERFAMILY Protein kinase-like (PK-like) 228 521 IPR011009 -
Mibi10g0289 629 MobiDBLite consensus disorder prediction 590 618 - -
Mibi10g0289 629 FunFam PR5-like receptor kinase 323 531 - -
Mibi10g0289 629 Gene3D Transferase(Phosphotransferase) domain 1 323 532 - -
Mibi10g0289 629 PANTHER RUST RESISTANCE KINASE LR10-RELATED 219 547 IPR045874 GO:0004672
Mibi10g0289 629 Pfam Protein tyrosine and serine/threonine kinase 252 520 IPR001245 GO:0004672|GO:0006468
Mibi10g0289 629 Pfam Wall-associated receptor kinase galacturonan-binding 35 96 IPR025287 GO:0030247
Mibi10g0289 629 MobiDBLite consensus disorder prediction 536 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0289 Mibi-ChrMibi10 4602055 4604804 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0289 146 566 Receptor kinase-like Gene Family AT4G18250 43.779 3.11e-108 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mibi10g0289 PK_Tyr_Ser-Thr 9.5e-47 CL0016