Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0279 ATGAGGGACATCATGTGTTACTACTCTTCAGGAAAATTAGTGGTGGCTGTGTGTCTGATGATCTCATTATGCGGAACTTGCAAGGCATCAGATGGAACACAGAACTGTTCAAGTTTGTGCGGAGATCACAACATTAGCAGCCCTTTTCGGGTAAAAGAATCTCCAGAGAAGTGTGGTGACAAGAAGTATGAGCTATCTTGCGAGAAGAACCAACTGTTCCTGTATTTGGAATCTATGAGATACAGAGTTTTGTCCATTAATTATTCTGTCGAAACAATCCGAGTGAGGGACGTTAGTATTGAGGTATTGAATTCATCTTCCCTTCCTCAGTATTCTTTAACAGGCTACAACTTAAGCGGAGGGTATCTTTATACCTCCTATTCTAATAATATAACGATATACGTAAGGTGTGAACACCCAATGGATTCCCCTGGGTTTGTGGACACGGCCCCTTGCTTCAACACCTCAAATGGCTCTCTATCTTCTTCTTCTTCATCGAATTTGTATGTCTATGTTGGGAGCGGATATTTAAGTTATATGGGGTTAGAGGATGGTTGTCTAATAGAAATGATGTATCTCACTTCCTGGTCTGATCCGAAAAACCAGTCCTTGTCCTGCACACACATCCACACTATACTTCTTTATGGCTTTGAGCTTTCTTGGGAACTTTTCATTGAAAACTATAGCATTTGGAAACAGATCCTTTGGGCTATCACAGACTATTGGACATACATCCAGGCTCTGATAGTATTAGCTATGTATAGTGGTGCTAAATTTGTGTTGGGGGCTCCGTTTGTCATTTACCTTTTGATCTACAAATGGCGAAGAAGGCATTTATCAGTGTATGACAGCATTGAAGATTTTCTGCAAAGCGACAGCAACAGCATCATGCCTATAAGGTACTCATATAGAGACATCAAGAAGATGACCAAAGGGTTTAAAATAAGACTTGGGAAAGGAGGCTATGGCTCTGTCTTCAAAGGAAAACTTCGAAGTGGCCGTGATGTGGCTGTCAAGATGCTGGATAAGGCTGAAGCCAATGGTCAGGATTTCATAAATGAAGTTGCTACACTTGGTAGAATCCACCATGTAAATGTTGTGCATCTCATTGGTTATTGTGTGGAAGGATCAAAACGTGCTCTTATCTATGAATTCATGCAAAATGGATCTCTTGACAAACATATTCTCTCTAAAAATGCTGACAATGAGCAATCCTTGGATCTTCATCAATTGTATACCATTTCTCTTGGAGTAGCTCGTGGTATTCAATATCTTCACAAAGGATGTCATATGCAAATTCTACATTTTGATATAAAGCCACACAACATCCTTCTCGATGACAACTTCAACCCAAAGGTTTCTGATTTCGGCCTTGCTAAACTCTATCCCACAAATGATAGCATTGTGTCACTCACAGCAGCAAGAGGAACTATAGGATACATGGCTCCTGAGCTCTTCTACAAAAATGTAGGCAGAGTCTCCTATAAAGCTGATGTCTATAGCTTTGGGATGTTATTAATGGAGATGGCTGGCAGAAGGAAGAATTTGAATGTGTTTGCCGAGCAATCGAGTCAACTTTATTTCCCTTTTTGGGCTTATGATCAACTAAATGAAGGAAATGAAATTAGCATAGCAGATGCAACAGAGGAAGAAATGAAAGTGGCAAGGAAAATGGTGATTGTTGCCTTGTGGTGCATTCAAACCAAGCCTAGCAATCGTCCTTCAATGAACAAAGTTGTCGAGATGCTTGAAGGAGAAGAGAAGGACTTAGAATTGCCTCAAAAGCCTTATCTATACCCACAAGATTTACCAGCAACTGATGATAATGATAATCATTCAACACATCAATCCAAGTCAAGCAGTCATCCATCAATGAACAAAGCTGTGGAGATACTTGAAGTAGAGGAGAAAGAGTTAGTATTGCCTCACCAGCCTTTTCAATTCACACAAGATTCACCAACAGTTGATGTTAGTGATCATTTATGTTCAACGCCTCCATCTTATGATCCTCCAATGAAGAATTCTAAAGAAACAACCTCGTTTTTAACTAAACAAGATGAGAGATCAATATAA 2073 0.398 MRDIMCYYSSGKLVVAVCLMISLCGTCKASDGTQNCSSLCGDHNISSPFRVKESPEKCGDKKYELSCEKNQLFLYLESMRYRVLSINYSVETIRVRDVSIEVLNSSSLPQYSLTGYNLSGGYLYTSYSNNITIYVRCEHPMDSPGFVDTAPCFNTSNGSLSSSSSSNLYVYVGSGYLSYMGLEDGCLIEMMYLTSWSDPKNQSLSCTHIHTILLYGFELSWELFIENYSIWKQILWAITDYWTYIQALIVLAMYSGAKFVLGAPFVIYLLIYKWRRRHLSVYDSIEDFLQSDSNSIMPIRYSYRDIKKMTKGFKIRLGKGGYGSVFKGKLRSGRDVAVKMLDKAEANGQDFINEVATLGRIHHVNVVHLIGYCVEGSKRALIYEFMQNGSLDKHILSKNADNEQSLDLHQLYTISLGVARGIQYLHKGCHMQILHFDIKPHNILLDDNFNPKVSDFGLAKLYPTNDSIVSLTAARGTIGYMAPELFYKNVGRVSYKADVYSFGMLLMEMAGRRKNLNVFAEQSSQLYFPFWAYDQLNEGNEISIADATEEEMKVARKMVIVALWCIQTKPSNRPSMNKVVEMLEGEEKDLELPQKPYLYPQDLPATDDNDNHSTHQSKSSSHPSMNKAVEILEVEEKELVLPHQPFQFTQDSPTVDVSDHLCSTPPSYDPPMKNSKETTSFLTKQDERSI 690
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0279 690 Gene3D Transferase(Phosphotransferase) domain 1 386 595 - -
Mibi10g0279 690 MobiDBLite consensus disorder prediction 648 690 - -
Mibi10g0279 690 Pfam Wall-associated receptor kinase galacturonan-binding 36 97 IPR025287 GO:0030247
Mibi10g0279 690 Gene3D Phosphorylase Kinase; domain 1 286 385 - -
Mibi10g0279 690 FunFam PR5-like receptor kinase 386 594 - -
Mibi10g0279 690 FunFam serine/threonine-protein kinase PBS1-like 281 385 - -
Mibi10g0279 690 MobiDBLite consensus disorder prediction 591 625 - -
Mibi10g0279 690 Pfam Protein tyrosine and serine/threonine kinase 315 583 IPR001245 GO:0004672|GO:0006468
Mibi10g0279 690 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Mibi10g0279 690 PANTHER RUST RESISTANCE KINASE LR10-RELATED 283 608 IPR045874 GO:0004672
Mibi10g0279 690 ProSiteProfiles Protein kinase domain profile. 311 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0279 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Mibi10g0279 690 SMART serkin_6 311 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0279 690 SUPERFAMILY Protein kinase-like (PK-like) 290 584 IPR011009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi10g0279 Mibi-ChrMibi10 4473715 4476485 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0279 8 599 Receptor kinase-like Gene Family AT5G38260 34.961 7.34e-108 339
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mibi10g0279 PK_Tyr_Ser-Thr 1.1e-46 CL0016