Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0278 ATGACATTAGGAACTTGTTATTATCTCATCTTGCCAGTTGGGGGAAGCCACCAGGACATGGAAACTTCACATGTTAACTCCTTCTCTATATGCTTCTTACTAATTCTTTGGTTCTCAGGTTCTGTAGGAAGCTTGAATAGCAGCTGTCCACAACCTGAAACAAGATGTGGAAACCTTCATGTTCGGTTTCCTTTCCGGATAATAGGAAGCCAACCAGCACATTGTGGGTACCCTGGGTTTGATTTGCAATGTTCACCTGCAAATCAAGCTGTTTTTGAACTTCCTGGATCAGTGAAGCTCAATGTCAAACTTATTGATTACAAATCCCAAACCATTCACTTATATGATCCTTCTGGTTGCCTTTTTATGCATGTCCCTAACCTCACTCTACTTCCTCTCCCTTTCCAATTCGCAACCTGGTACTCGTATCTCTATAATTACACCTTTTTCAATTGCTCATATCCAAGAGACTACGGAGGATTATTCTCAACGTGCCTCAGAAGCTCTACCTATCATGTATATGCCGTTGACTCTGATAGTGATCTTGGACAACTTCCCTTGTTATTTTGCAGAAAAATATTTAACATTTCATCCATCCCATATGGGATTATTGAAAATCATGATGACACTCTTCAGTTGATGTGGTCTCATCCAATGTGTGAACTTTGTGAATCAAATGGAACAAGATGTGGATTCAGCAATAGTTCTACCAATTATAATACTACTGCATGTTTCGAAGTTCTTCACAAAGGCTCATCAAACAAATTTGTAATTACAGGATCAATCATGGGCTCATTTCTTCTAGTGGTGGCAATGGTTGTAATTCATTATATTCGCAACTCTTACAAATCACGGAAGGAAAGCCAAGCTATAATTGAAAAGTTTCTGAAAGATTATAGAGCTCTAAAGCCTACCAGATATTCTTATGCAGAAATCAAGAGGATTACCAATCAATTTGAGCTCAAATTAGGGGAAGGATCTTTTGGTACTGTATACAAAGGAAACATTTCATCTGAGTTCCAAGTTGCAGTGAAGATTCTCACTAATTCTGAAGGAAATGGTGAAGAGTTCGTCACTGAAGTTGGGACAATGGGCAAAATCCATCACATCAACATTATTCACTTAATGGGGTTTTGTGCTGATGGCTTTAGAAGAGCACTAGTTTACAAATACTTTCCAAATGGTTCGTTACAAAATTTCATTAATTCTCCAGATAATAGACAAAACTTTATTGGTTGGAAAAGGCTTCATGACATTGCTTTAGGCATAGCCAAAGGAATCGAGTACCTTCATCAAGGGTGTGAGCAACGTATACTTCATTTTGACATCAAACCTCACAATGTTTTATTAGATGATGACTTCACACCAAAAATATGTGATTTTGGCCTAGCCAAATTGTGCTCCAAAGAGCAAAGCATAGTGTCGATGACTAATGCTAGAGGAACTTTAGGTTACATTGCTCCAGAAGTCTTCTCTCGAAATTTCGGAAATGTGTCACACAAGGCAGATGTTTATAGTTTTGGGATGTTGCTACTTGAATCGATAGGGGGAAGAAGGATCACGCATGACGCAAAAGAAAATGCTCCTAAGATTTACTATCCCGAATGGATATATAATATATTAGAAGAAAGGGAGGATGTAAGGATTCATATTGAGGAAGAAAGTGATGCTAAAATTGCAAAGAAGTTGGGAATAGTGGGACTGTGGTGCATTCAGTGGCATCCAATGGACCGACCATCAATGCAAGTAGTGGTTCAAATGTTAGAAGGAGAAGGAGAAAAATTACCAATACCACCTAATCCTTTTGATTCTGAAGGTACATCAACAAGAAAAAGGGCCAGCGTGCCTTCAAGAAGTTTGATGCAAGGTTTAGAAATAATCCAAGAAGTAGAGTGA 1896 0.3845 MTLGTCYYLILPVGGSHQDMETSHVNSFSICFLLILWFSGSVGSLNSSCPQPETRCGNLHVRFPFRIIGSQPAHCGYPGFDLQCSPANQAVFELPGSVKLNVKLIDYKSQTIHLYDPSGCLFMHVPNLTLLPLPFQFATWYSYLYNYTFFNCSYPRDYGGLFSTCLRSSTYHVYAVDSDSDLGQLPLLFCRKIFNISSIPYGIIENHDDTLQLMWSHPMCELCESNGTRCGFSNSSTNYNTTACFEVLHKGSSNKFVITGSIMGSFLLVVAMVVIHYIRNSYKSRKESQAIIEKFLKDYRALKPTRYSYAEIKRITNQFELKLGEGSFGTVYKGNISSEFQVAVKILTNSEGNGEEFVTEVGTMGKIHHINIIHLMGFCADGFRRALVYKYFPNGSLQNFINSPDNRQNFIGWKRLHDIALGIAKGIEYLHQGCEQRILHFDIKPHNVLLDDDFTPKICDFGLAKLCSKEQSIVSMTNARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLESIGGRRITHDAKENAPKIYYPEWIYNILEEREDVRIHIEEESDAKIAKKLGIVGLWCIQWHPMDRPSMQVVVQMLEGEGEKLPIPPNPFDSEGTSTRKRASVPSRSLMQGLEIIQEVE 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0278 631 Gene3D Transferase(Phosphotransferase) domain 1 392 595 - -
Mibi10g0278 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Mibi10g0278 631 PANTHER RUST RESISTANCE KINASE LR10-RELATED 288 608 IPR045874 GO:0004672
Mibi10g0278 631 MobiDBLite consensus disorder prediction 595 616 - -
Mibi10g0278 631 SUPERFAMILY Protein kinase-like (PK-like) 301 589 IPR011009 -
Mibi10g0278 631 SMART serkin_6 317 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0278 631 Pfam Wall-associated receptor kinase galacturonan-binding 49 116 IPR025287 GO:0030247
Mibi10g0278 631 Pfam Protein kinase domain 322 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0278 631 FunFam PR5-like receptor kinase 392 599 - -
Mibi10g0278 631 Gene3D Phosphorylase Kinase; domain 1 292 391 - -
Mibi10g0278 631 MobiDBLite consensus disorder prediction 602 616 - -
Mibi10g0278 631 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Mibi10g0278 631 FunFam serine/threonine-protein kinase PBS1-like 284 391 - -
Mibi10g0278 631 ProSiteProfiles Protein kinase domain profile. 317 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0278 Mibi-ChrMibi10 4471193 4473399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0278 220 626 Receptor kinase-like Gene Family AT1G66910 42.757 6.53e-109 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mibi10g0278 Pkinase 3.8e-47 CL0016