Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0238 ATGGCCATAAGGCCCTTCCATTTCACCTTCTTCTCCCCTCATAGATTCTCCTCTCTTCTTCGCTCGCCTCCACTTTCTTCTTCTTCTTCCTCCTCCTCCTTTCCCTGTCATCACAATCTTCCATTGTTTTCTCGATTGCTTTTCCCTCTTTCTCTTTTCCGTCACTTCACGGCGTTATCTGCCACTCCGTTCTCACGCGCTCCACAGTGCTATCCGCCGTCTCATCCTCACGACGACCGTCCTCGGCCGTCGTCTCCGTCCACCACTCTGGCTCAGAAGATTGGTAAATCCATTCGCCGTGCCGGCGCCGCCTCCAAAGCGAGGGTTTATGCCGATGTCAACGTTCTTCGTCCCAAGGAATATTGGGACTATGAGTCTCTCACCGTCCAGTGGGGGGAGCAAGATGATTATGAGGTTTCGAGGAAGGTGGGAAGGGGGAAATACAGTGAGGTGTTTGAGGGCGTTCACTGCACAGACAATGAAAAGTGCATCATTAAGATTCTGAAGCCAGTGAAGAAGAAGAAGATCAAGAGGGAGATCAAAATATTGCAGAATCTTTGTGGAGGGCCCAATATTGTGAAGTTGCTTGACATTGTCAGAGATCAGCAGTCAAAGACTCCAAGCCTCATTTTTGAATATGTTAACAACACTGATTTTAAAGTGCTCTATCCTACACTATCAGACCATGATATACGATATTACATCTACGAGCTTCTAAAGGCCCTGGATTATTGCCATTCACAAGGAATTATGCATCGGGATGTAAAGCCACATAATGTAATGATTGACCATGATCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAATTCTATCATCCTGGTAAAGAATATAATGTTCGAGTTGCCTCAAGGTATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTTTAGATTTATGGAGTCTTGGTTGTATGCTTGCTGGCATGATTTTTCGTAAGGAGCCATTCTTTTATGGACATGACAATTATGATCAACTGGTCAAAATTGCTAAAGTACTTGGGACAGATGAATTGTATGCATATTTGAACAAGTATCGGATAGAGTTGGACCCAAATCTTGCCGCACTTGTTGGAAGGCATAGTCGGCGGCCATGGACTAAGTTCATTAACGTTGATAATCAACATTTGGCTGTTCCTGAGGCTATTGACTTTGTTGACAAGTTGTTGCGATATGATCACCAAGAACGTCCCACAGCAAAGGAAGCCATGAGTCATCCTTACTTCAATCCTGTTAGAAATGCCGAAAGCAGTCGATCTCGTGCTCATTGA 1311 0.4477 MAIRPFHFTFFSPHRFSSLLRSPPLSSSSSSSSFPCHHNLPLFSRLLFPLSLFRHFTALSATPFSRAPQCYPPSHPHDDRPRPSSPSTTLAQKIGKSIRRAGAASKARVYADVNVLRPKEYWDYESLTVQWGEQDDYEVSRKVGRGKYSEVFEGVHCTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDHDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHDQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMLAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELYAYLNKYRIELDPNLAALVGRHSRRPWTKFINVDNQHLAVPEAIDFVDKLLRYDHQERPTAKEAMSHPYFNPVRNAESSRSRAH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0238 436 MobiDBLite consensus disorder prediction 416 436 - -
Mibi10g0238 436 Gene3D Transferase(Phosphotransferase) domain 1 214 422 - -
Mibi10g0238 436 PANTHER CASEIN KINASE II SUBUNIT ALPHA 98 431 IPR045216 GO:0004674|GO:0006468
Mibi10g0238 436 Pfam Protein kinase domain 137 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0238 436 SMART serkin_6 137 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0238 436 ProSiteProfiles Protein kinase domain profile. 137 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0238 436 SUPERFAMILY Protein kinase-like (PK-like) 111 426 IPR011009 -
Mibi10g0238 436 FunFam Casein kinase II subunit alpha 214 425 - -
Mibi10g0238 436 Gene3D Phosphorylase Kinase; domain 1 137 213 - -
Mibi10g0238 436 CDD STKc_CK2_alpha 118 422 IPR045216 GO:0004674|GO:0006468
Mibi10g0238 436 FunFam Casein kinase II subunit alpha 123 213 - -
Mibi10g0238 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Mibi10g0238 436 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Mibi10g0238 436 MobiDBLite consensus disorder prediction 67 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0238 Mibi-ChrMibi10 4045128 4056132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0238 135 423 Core Cell Cycle Gene Families AT1G76540 30.255 6.12e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Mibi10g0238 Pkinase 9.5e-66 CL0016