Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0237 ATGGGAGATGAGTACGGTAGGAATAGGATAGTGGTAGTGAGAGAGTTCGACGCAGAAAAAGACAGAGAGAGAGTAGAAGCAGTCGAAAGAATCTGTGAAGTTGGTCCCAGCGGAAAGCTCTCCCTCTTCACCGACCTCCGAGGTGACCCTATTTGCAGGGTCCGCCACTCCCCTGCTTTTCGCATGCTGGTGGCTGAAATTGGAGAAGAGATTGTTGGAATGATAAGAGGCTGCATCAAAACCGTCACATGCGGAAGAAAACTCTCCAGAAATTTCACCAAATCTCACTCCACTGAAACCCTACCTGTATACACAAAACTCGCCTACATCTTAGGCCTTCGCGTTTCACCTTCTCACCGGAGAATGGGAATAGGCCTAAAGCTTGTGAACACAATGGAGGATTGGTTCAGAAATAACGGAGCAGAATACTCATACATGGCGACAGAAAAGGACAATTTACCTTCCGTTTCGCTCTTCACCGACAAATGTGGTTACTCCAAGTTCCGTACACCATCGATCTTAGTGAATCCAGTCTTCGCTCACAAGATTAACATCTCAAACAAGATAACGATTCTCAAACTCAATCCGTACGACGCCGAAAAACTCTACCGGCGACGATTTTCCACCACCGAGTTCTTCCCTCGTGACATTCGCTCCATCCTCAACAATAAGCTTAATCTCGGAACCTTCCTCGCGGTTCCGAGAGGGTCGTACGGACCGGACACGTGGCCCGGGTCGGATAATTTCCTCGCGGGCCCACCGGAGTCATGGGCGGTTATGAGCGCGTGGAACTGTAAGGAGGTGTTCACGCTCGAGGTTCGTGGCGCGTCGCGCGTGAAGAGGGCTTTGGCGAAAACGACACGGGTTGTGGACAGGGTGTTGCCGTTTTTGAAGGTGCCGTCGTTTCCGGATTTTTTTAGGCCGTTTGGGGTGCATTTTATGTATGGGTTGGGAGGGGAAGGGAGGGAAGTGGGGAGGATGGTGAGGGCGTTGTGTGGCCACGCGCATAATGTCGCGAGGGCGCGTGGGTGTGGGGCGGTTGTGACGGAGGTGGCGAGTTGTGAGCCGTTGAAGTTAGCGATTCCTCACTGGAAGATGCTATCGTGCGCCGAGGATTTGTGGTGTATTAAGAGGCTTGAGGAGGATTATAGTGATGGTTCTGTTGGTGACTGGACTAAATCTCCACCTGGATTGTCCATTTTTGTTGACCCCAGAGAATTCTAA 1224 0.5114 MGDEYGRNRIVVVREFDAEKDRERVEAVERICEVGPSGKLSLFTDLRGDPICRVRHSPAFRMLVAEIGEEIVGMIRGCIKTVTCGRKLSRNFTKSHSTETLPVYTKLAYILGLRVSPSHRRMGIGLKLVNTMEDWFRNNGAEYSYMATEKDNLPSVSLFTDKCGYSKFRTPSILVNPVFAHKINISNKITILKLNPYDAEKLYRRRFSTTEFFPRDIRSILNNKLNLGTFLAVPRGSYGPDTWPGSDNFLAGPPESWAVMSAWNCKEVFTLEVRGASRVKRALAKTTRVVDRVLPFLKVPSFPDFFRPFGVHFMYGLGGEGREVGRMVRALCGHAHNVARARGCGAVVTEVASCEPLKLAIPHWKMLSCAEDLWCIKRLEEDYSDGSVGDWTKSPPGLSIFVDPREF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0237 407 CDD NAT_SF 62 143 - -
Mibi10g0237 407 Pfam Acetyltransferase (GNAT) family 58 165 IPR000182 GO:0016747
Mibi10g0237 407 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 52 167 IPR016181 -
Mibi10g0237 407 FunFam Probable N-acetyltransferase HLS1-like 20 172 - -
Mibi10g0237 407 Gene3D - 49 171 - -
Mibi10g0237 407 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 407 - -
Mibi10g0237 407 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 186 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0237 Mibi-ChrMibi10 3981631 3983071 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mibi10g0237 Acetyltransf_1 1.4e-18 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1757 12 33753792 33755390 Mibi10g0237 10 3981631 3983071 CCT
Mibi10g0237 10 3981631 3983071 Mibi10g0237 10 3981631 3983071 ECH