Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0232 ATGTCGTTACCCAAATTTCGGAAACTTCTCATATTTCCCTCTCCTCTGTTTCTTCCTTTTCTTCCTTTCTCACATTCCGACCACCCTCTTTCCCATTTTCCGACAAATGGGGCTTTCAAGCTCCATGCTTTTACAGCTTCTGCTTGTGATACCCAGGAGGCATTGGGGTCAGAGAGCAAAGGGTATTGGACGATGGAGACTTATTTACAGGAGAACTTTGAAGTAAAGTCCAAGAATTCATCTGCAGAGGTTCTTCAGAATTGGAGAAAACTATGTGGGATTGTGAAGAACCCCAAAAGAAGGTTTCGCTTCACAGCTAATCTTGACAAGCGAGGCGAAGCCGCTGCTATGCGTCGCTCTAATCAGGAGAAATTGAGGGTTGCTGTTTTGGTTTCCAAAGCTGCATTTCAGTTTATCCAAGGTGTGGAGCCAAGTGATTACACAGTACCTGAAGAAGTTAGAGAAGCGGGGTTTCAAATCTGTGCGGATGAATTGGAGTCCATTGTAGAAAGACATGACATAAAGAAGCTAAAATTCCATGGTGGGGTTGACGGTATTGCCCAAAAGCTTTCAACTTCAACCGATGATGGTATTAACAATTACTCTGACCAACTCATCAAGAGACAAGAAATCTACGGAATCAACAAATTCACAGAGAGTGAATCCCGTAGTTTCTGGGTTTTTGTCTTCGAAGCACTTCAAGACATGACACTAATGATCCTAGGAGTGTGTGCTATTGTGTCCCTAATCATTGGAATAGCCACAGAAGGATGGCCCAGAGGAGCTCACGATGGCCTAGGAATTGTCCTAAGTATCCTTCTGGTCGTGTTTGTGACAGCAACAAGTGATTATCGCCAATCATTACAGTTCAAGGATTTAGACAAGGAGAAAAAAAAGATCTCCATGCAGGTCACAAGAAATGGGTACAGGAAAAAAATGTCAATATATGATTTAGTCCCAGGTGATATTGTGCACCTTGCTATAGGAGATCAAGTCCCCACGGACGGACTCTTTGTTTCAGGATTCTCTGTTTTGATTGATGAATCAAGTTTAACTGGAGAAAGTGAGCCAGTTATGGTGAATTCTCAGAACCCATTTCTTCTTTCTGGAACCAAAGTTCAAGATGGATCCTGCAAGATGTTAGTTACAACTGTAGGAATGAGAACTCAGTGGGGAAAATTAATGGCTACTTTAAGTGAAGGTGGAGACGATGAAACACCATTACAGGTGAAACTTAATGGAGTGGCAACTATTATAGGGAAGATAGGCCTATTCTTTGCGGTTATTACTTTTGTTGTTTTGGTGAAGGGACTTATGGCACGTAAACGACAAGAAGGAAGATTTTGGAGTGTGTCTGGAGACGATGCTATGGAGATGTTGGAATTCTTCGCCGTTGCGGTTACAATTGTTGTCGTTGCAGTCCCTGAAGGATTGCCATTAGCTGTGACACTTAGCCTTGCGTTTGCTATGAAAAAAATGATGAACGACAAAGCACTTGTTCGTCATTTAGCTGCTTGTGAAACCATGGGTTCAGCCACTAGTATATGTAGTGACAAGACAGGAACCTTGACGACCAATCATATGACTGTCGTTAAAACCTGCATTTGTATGAACATTAAGGAAGTAACCAATGATAATAATGGAGACAAAGATTCTGGGCTACCAGATTTTGCTATGAAAATGTTACTAGAGTCTATATTTAATAATACTAGTGGAGAAGTTGTGGCTAAGAGAAGAAGAAGCAAAAGGAAACGTGAGATATTAGGGACGCCTACTGAGGCTGCAATATTGGAGTATGGATTATCACTAGGTGGGGATTTTCAGAAAGAGAGGAAAGCATGTAAGATTGTGAAAGTTGAGCCATTTAACTCAGAAAAGAAGAGGATGGGTGTGGTTTTGGAGCTTCCTGAAGGGAATCTTAGAGCTCATTGTAAAGGTGCTTCTGAGATAGTTCTAGCTGCTTGTGATAAAGTGATTGATTCAAATGGAGAGGTAGTGCCAATTGATGCAGAGAAGAGTAATTATCTTAAAGAAACAATCCATTCCTTTGCTTGTGAGGCACTTAGAACTCTGTGTCTTGCCTATGTGGAATTGGAAAATGGGTTTTCTGCTGAAGATGCGATTCCTAGTAGTGGATATACTTGTATTGGGATTGTTGGGATCAAAGATCCTGTTCGTCCTGGTGTTAAGGAATCTGTTGCAACCTGTCGTAAAGCAGGTATAACAGTTAGAATGGTCACAGGTGATAATATTAATACTGCCAAGGCTATAGCCAGAGAATGTGGGATTTTAACAGATGATGGTATAGCCATTGAAGGTCCAGATTTCAGAGAGATGACTCAGGAGGAAATGTTTGAACTAATTCCTAAAATTCAGGTTATGGCTAGATCGTCTCCATTAGATAAGCATATTTTGGTGAAACAACTGCGTACTACGTTTGGAGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGACGCCCCTGCCCTTCATGAGGCAGACATTGGGCTTGCAATGGGAATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCTGATGTCATCATTCTGGATGATAATTTCTCTACTATAGTGACAGTGGCAAAATGGGGTCGTTCAGTTTACATTAACATTCAAAAATTTGTACAGTTTCAGCTGACAGTTAATGTGGTAGCCTTACTTGTGAACTTCAGTTCAGCATGCACAACAGGAAGTGCACCTCTTACAGCAGTTCAATTATTGTGGGTGAACATGATAATGGACACACTTGGAGCACTTGCGCTAGCAACGGAACCTCCAAACGACGAACTAATGAAGCGTTCACCAGTGGGAAGGCAGGGAAGTTTCATCAGCAATGTGATGTGGAGGAACGTCTTAGGCCAATCTCTGTATCAAGTCCTGCTGATATGGGTTCTTCAGGCCAAAGGGAAATGGATCTTTGGAATGAAGGGTCCAGATTCTGATCTCTTATTAAACACACTCATTTTCAACTCATTTGTCTTCTGTCAGGTTTTCAACGAGATCAGCTCAAGAGAGATGGAGGAAATAGATGTATTTAAGGGCATATTGGATAATCATGTTTTTGTGGCTGTCATAAGTGTCACTGTTTTGTTTCAAATCATGATAGTTGAGCATTTAGGAACCTTCGCTAACACCACACCACTTGCTCCCATTTACTGGTTGTTCAGCGTTTTTGTTGGATATTTAGGCATGCGCATTGCTGCTCACTTAAAGAAAATCCCTGTCTGA 3246 0.4153 MSLPKFRKLLIFPSPLFLPFLPFSHSDHPLSHFPTNGAFKLHAFTASACDTQEALGSESKGYWTMETYLQENFEVKSKNSSAEVLQNWRKLCGIVKNPKRRFRFTANLDKRGEAAAMRRSNQEKLRVAVLVSKAAFQFIQGVEPSDYTVPEEVREAGFQICADELESIVERHDIKKLKFHGGVDGIAQKLSTSTDDGINNYSDQLIKRQEIYGINKFTESESRSFWVFVFEALQDMTLMILGVCAIVSLIIGIATEGWPRGAHDGLGIVLSILLVVFVTATSDYRQSLQFKDLDKEKKKISMQVTRNGYRKKMSIYDLVPGDIVHLAIGDQVPTDGLFVSGFSVLIDESSLTGESEPVMVNSQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFVVLVKGLMARKRQEGRFWSVSGDDAMEMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKTCICMNIKEVTNDNNGDKDSGLPDFAMKMLLESIFNNTSGEVVAKRRRSKRKREILGTPTEAAILEYGLSLGGDFQKERKACKIVKVEPFNSEKKRMGVVLELPEGNLRAHCKGASEIVLAACDKVIDSNGEVVPIDAEKSNYLKETIHSFACEALRTLCLAYVELENGFSAEDAIPSSGYTCIGIVGIKDPVRPGVKESVATCRKAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREMTQEEMFELIPKIQVMARSSPLDKHILVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACTTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRQGSFISNVMWRNVLGQSLYQVLLIWVLQAKGKWIFGMKGPDSDLLLNTLIFNSFVFCQVFNEISSREMEEIDVFKGILDNHVFVAVISVTVLFQIMIVEHLGTFANTTPLAPIYWLFSVFVGYLGMRIAAHLKKIPV 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0232 1081 Gene3D - 231 1068 - -
Mibi10g0232 1081 FunFam Calcium-transporting ATPase 713 865 - -
Mibi10g0232 1081 ProSitePatterns E1-E2 ATPases phosphorylation site. 518 524 IPR018303 -
Mibi10g0232 1081 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 522 729 IPR023299 GO:0000166
Mibi10g0232 1081 Pfam Cation transporter/ATPase, N-terminus 180 248 IPR004014 -
Mibi10g0232 1081 FunFam Calcium-transporting ATPase 837 1081 - -
Mibi10g0232 1081 SFLD p-type atpase 498 872 IPR044492 -
Mibi10g0232 1081 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 170 1081 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi10g0232 1081 SUPERFAMILY Calcium ATPase, transduction domain A 302 396 IPR008250 -
Mibi10g0232 1081 FunFam Calcium-transporting ATPase 526 724 - -
Mibi10g0232 1081 Pfam Cation transport ATPase (P-type) 577 658 - -
Mibi10g0232 1081 SFLD Haloacid Dehalogenase 498 872 - -
Mibi10g0232 1081 Pfam Ca2+-ATPase N terminal autoinhibitory domain 69 112 IPR024750 GO:0005516
Mibi10g0232 1081 Gene3D - 80 140 - -
Mibi10g0232 1081 FunFam Calcium-transporting ATPase 80 140 - -
Mibi10g0232 1081 PRINTS P-type cation-transporting ATPase superfamily signature 844 856 - -
Mibi10g0232 1081 PRINTS P-type cation-transporting ATPase superfamily signature 739 749 - -
Mibi10g0232 1081 PRINTS P-type cation-transporting ATPase superfamily signature 347 361 - -
Mibi10g0232 1081 PRINTS P-type cation-transporting ATPase superfamily signature 717 728 - -
Mibi10g0232 1081 PRINTS P-type cation-transporting ATPase superfamily signature 516 530 - -
Mibi10g0232 1081 PRINTS P-type cation-transporting ATPase superfamily signature 820 839 - -
Mibi10g0232 1081 Pfam Cation transporting ATPase, C-terminus 905 1070 IPR006068 -
Mibi10g0232 1081 SUPERFAMILY Calcium ATPase, transmembrane domain M 180 1080 IPR023298 -
Mibi10g0232 1081 SUPERFAMILY HAD-like 515 925 IPR036412 -
Mibi10g0232 1081 Gene3D - 513 865 IPR023214 -
Mibi10g0232 1081 PANTHER CATION TRANSPORTING ATPASE 126 1080 - -
Mibi10g0232 1081 SMART Cation_ATPase_N_a_2 179 253 IPR004014 -
Mibi10g0232 1081 Gene3D - 526 724 IPR023299 GO:0000166
Mibi10g0232 1081 Gene3D - 203 399 - -
Mibi10g0232 1081 FunFam Calcium-transporting ATPase 279 399 - -
Mibi10g0232 1081 CDD P-type_ATPase_Ca_PMCA-like 207 953 - -
Mibi10g0232 1081 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 790 900 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi10g0232 1081 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 612 765 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi10g0232 1081 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 456 538 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi10g0232 1081 Pfam E1-E2 ATPase 299 494 - -
Mibi10g0232 1081 PRINTS H+-transporting ATPase (proton pump) signature 676 694 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi10g0232 1081 PRINTS H+-transporting ATPase (proton pump) signature 820 836 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi10g0232 1081 PRINTS H+-transporting ATPase (proton pump) signature 852 877 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0232 Mibi-ChrMibi10 3917344 3922302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0232 65 1081 Primary Pumps ATPases AT4G37640 80.157 0.0 1679