Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0231 ATGAGTTGCAACGGCTGCCGAGTCCTTCGAAAGGGATGCAGTGAGAATTGCATTCTGCGACCTTGCTTGCAGTGGATCGATACCCCTCAAGCCCAAGGCCACGCCACTGTCTTCGTCGCCAAATTCTTCGGCCGTGCTGGCCTCATGTCCTTCATTTCCAACGTCCCTCCCAACCAGAGACCTGCTCTGTTTCAGTCCTTGTTGTTCGAAGCGTGCGGCCGGACGGTGAACCCGGTGAACGGAGCCGTCGGGCTTCTCTGGACGGGAAACTGGCACGTGTGCCAGGCGGCTGTTGAGACAGTGCTTCGCGGCGGAACGTTGAAGCCGATGCCGGAGATTCTAGGCTTCGATTCTTCTTCGGCTCCGGCCATGGATGAGTTATCGGAAGCGGAGGTTACCTGCAATCAAATGCGGAGGATCCGAGATCCGAGATCGAATTTCAGAATCGGAGTTTCCGATGAGCCTGCAATGATTCAGACGGCGGATCTTGACCTCCGATTGACTCCGAGCTTCGTTCCTAATAAGGTTACTGGTTATGGCTGCGGACCGGAAGTCCGGCGACTCGGCTCGCCGTCGATGAACTCGGAAGAATCCGTCACGACGGCGACTTGTTTGGAAAGCGGAATCGGAGATCACCACCACCAGCAAGCTCACGGCGGAGACCGGAAGCTTCTGAACCTTTTCATTTGA 690 0.5623 MSCNGCRVLRKGCSENCILRPCLQWIDTPQAQGHATVFVAKFFGRAGLMSFISNVPPNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLKPMPEILGFDSSSAPAMDELSEAEVTCNQMRRIRDPRSNFRIGVSDEPAMIQTADLDLRLTPSFVPNKVTGYGCGPEVRRLGSPSMNSEESVTTATCLESGIGDHHHQQAHGGDRKLLNLFI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0231 229 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Mibi10g0231 229 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Mibi10g0231 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0231 Mibi-ChrMibi10 3890558 3891463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0231 1 228 AS2 family AT3G49940 53.876 4.86e-82 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi10g0231 LOB 1.3e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0231 10 3890558 3891463 Mibi12g1760 12 33794632 33795439 CCT
Mibi12g1760 12 33794632 33795439 Mibi10g0231 10 3890558 3891463 ECH
Mibi10g0231 10 3890558 3891463 Mibi10g0231 10 3890558 3891463 ECH