Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0229 ATGACGCAATTCACACCAACATTACCAACTTATTTGCACCAAATCACACCCCTTTCCAACTCCACCTGTGATTACAACAACGTTCAAGTTCCTTCAAGGACGAAGAATAATTCATGGCCGAAATTCCAACAATCCAAAGCATTAAGAAGCTTTGGAGATACTAGTTGCATGGAACAGTTACTTCTTCACTGTGCTGAAGCCATTGAAGCAAACGACGTCACCCTCACCCAACAAATCCTCTGGGTCCTCAACAACACCATCACCCCTCCCGACGGCGGCTCCAACCACCGCCTCGCCACCATATTCCTCCGCGCCCTCACCTCACGCGCCGCCAAAATTCTAGCCTCCGTAGTCCCAACCACCACCGCCACCACCGTCCACACCCACCGCTTCTCCGCCACGCAGCTCGCCAACTTCGTTGACGTCACGCCACGTCATCGGTTCGGCTTCACCGCCGCCAACTCAGCTATTCTAGAAGCTACAGAAGGTTTCTCCACCATCCACATCGTTGACCTAACCTCCACACACTGCATGCAAATCCCAACCCTAATTGACGCCATCGCCACCCATCGCCGCCATAATCATGACGTCACCCCTCACGTCAAGCTCACGGTAGTGACGGGAGAAGAACCTTCTAGAAACTTCCCTCCCTTCCTCACCCTCCCCTACGAAGAACTCGGGTCAAAGCTGGTCAACTTCGCAAGGTCAAAGAAAGTAATGATGGATTTTAAAGTCATATCATCAACCCACGAGGACGGATTCTCAGCTCTAATCCAGTACCTAGAGGTCCACCATAATAACCGTATGGTGACGGAAGCTTTGGTTATAAATTGTCACATGATGCTTCATTGTATACCCGACGAAACTGCTTCAACTGATTCTTCTTCTTCATCTTCATGTTCCATGAGATCGATGTTTCTGAAATGGTTGAGGAGGTTGGAGCCAAGGCTTGTCGTTTTGGTGGAGGATGACGTGGACATGACGTGGAGGGATTTGGTGAGTAGGGTGAGGGCTGCGTTTAACTATATGTGGATACCGTACGACATGGTGGATATGTTGGTACAAAGAGGGAGTGAAGAGAGGGATTGGTATGAAGAGGAGATATGTTGGAGGGTGGAGAATGTGATTGCGTGTGATGGGGTTGATAGGGTGGAGAGAATGGAGGGTAGGAGAAGGTGGGAGCAGCGGATGAGAGATGCTGCGTTTCAGGGGATTGGCTTCTCCAACGACGCCGTTTCGGAGGTGAAGGAGTTGCTTGATGAGCATGCTGCTGCTTGGGGGTTTAAGAGGCAGGACCCACATCTTCTGCTCACTTGGAAGGGGCATGATGTCGTTTTTGCATCTGCTTGGGTTCCTGCTTGA 1362 0.5059 MTQFTPTLPTYLHQITPLSNSTCDYNNVQVPSRTKNNSWPKFQQSKALRSFGDTSCMEQLLLHCAEAIEANDVTLTQQILWVLNNTITPPDGGSNHRLATIFLRALTSRAAKILASVVPTTTATTVHTHRFSATQLANFVDVTPRHRFGFTAANSAILEATEGFSTIHIVDLTSTHCMQIPTLIDAIATHRRHNHDVTPHVKLTVVTGEEPSRNFPPFLTLPYEELGSKLVNFARSKKVMMDFKVISSTHEDGFSALIQYLEVHHNNRMVTEALVINCHMMLHCIPDETASTDSSSSSSCSMRSMFLKWLRRLEPRLVVLVEDDVDMTWRDLVSRVRAAFNYMWIPYDMVDMLVQRGSEERDWYEEEICWRVENVIACDGVDRVERMEGRRRWEQRMRDAAFQGIGFSNDAVSEVKELLDEHAAAWGFKRQDPHLLLTWKGHDVVFASAWVPA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0229 453 ProSiteProfiles GRAS family profile. 48 451 IPR005202 -
Mibi10g0229 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 56 440 IPR005202 -
Mibi10g0229 453 Pfam GRAS domain family 57 450 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0229 Mibi-ChrMibi10 3805026 3806387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0229 41 452 GRAS Transcription Factor Family AT3G49950 54.762 1.00e-154 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi10g0229 GRAS 2e-86 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0229 10 3805026 3806387 Mibi10g0229 10 3805026 3806387 ECH