Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0204 ATGTCCACCCACCACCACCATAACCAACCCCTCCTTCAGGAGGAGGAGGAGTCGCCGGAAACCGCCTACGATGCATCGGAAAAGATCGTCGTCGTCGGAGCCGACAACCTCGACGACTCCGAACCCGACAATCTCGGCCGGGTGCCACCGTTCTCATGGAGGAAGCTATGGCTATTCACTGGCCCTGGTTTTCTCATGAGCATAGCGTTTCTGGATCCAGGGAATTTGGAGGGTGATCTTCAAGCTGGTGCTGTTGCTGGCTACTCCCTTCTATGGCTCCTCATGTGGGCCACGGCTATGGGGCTTCTTGTTCAGCTCCTTTCGGCTCGGCTTGGGGTTGCCACTGGGAGGCATTTGGCTGAGCTTTGCAGAGAGGAGTACCCTACGTGGGCCCGGTTGGTTCTCTGGGTTATGGCGGAATTGGCTCTGATTGGGGCTGATATTCAAGAGGTTATTGGGAGTGCTATTGCTATTAGGATTCTCAGTAATGGGTTTGTTCCTCTTTGGGCTGGTGTCGTCATCACAGCTTTGGATTGCTTTATCTTTCTTTTTCTGGAGAACTATGGTGTGAGGAAACTGGAAGCACTTTTTGCGATTCTCATTGGTATAATGGCGCTTTCATTTGCGTGGATGTTTGGTGAAGCAAAGCCCGATGGCTTAGATATTCTTCTGGGTCTTTTGGTTCCAAAACTTAGTTCCAAAACAATACAGCAGGCTGTCGCAGTTGTTGGCTGCATTATCATGCCTCACAATGTGTTCTTGCACTCTGCTCTTGTTCAGTCGAGACATATTGATTCAACTAAGAAAGGACGAGTTCAAGAAGCTGTTAATTATTATACTATCGAATCCACCGTTGCACTTGCGGTCTCCTTAGTCATTAACATATTTGTCACAACTGTGTTTGCCAAGGGTTTCTATGGCACTGAGATAGCAAATTCCATTGGTCTTGAAAATGCAGGGCAGTATCTTCAGCAGAAGTATGGTGGTGGACTTTTTCCGATCTTGTATATATGGGGTATTGGGTTATTAGCAGCTGGCCAAAGTAGCACCATTACCGGAACTTATGCTGGACAATTTATTATGGGGGGTTTTCTGAATTTAAGGTTGAAAAAATGGGTCAGGGCTTTAATTACACGAAGTTGCGCCATCATCCCAACCATTATCGTTGCTCTTGTCTTTGATACCTCTGAGGACTCATTAGATGTCCTAAATGAATGGCTCAATATTCTTCAGTCAGTTCAAATACCTTTCGCTCTTATTCCCTTGCTTTGCTTGGTGTCCAAGGAGCAGTTGATGGGGACTTTCAAGATTGGCATTGTACTCAAGATTATTTCCTGGTTTGTGGCTGCTTTAGTGATAGTCATTAACGGCTATCTATTGGTGGAATTCTTCTCCTCTGAAGTAAATGGACCAGTGATTGGTACCATAGTGTCTGTATTTACAATCTTGTATGTTGCGTTTATAGTCTACCTTGCTTCACGAATGATCACCTTCTTGCCGTGGCAAAGATTTTCGCAAACCAAGATGAACACTAACACAGAATTGACGAGTTGA 1554 0.4582 MSTHHHHNQPLLQEEEESPETAYDASEKIVVVGADNLDDSEPDNLGRVPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCREEYPTWARLVLWVMAELALIGADIQEVIGSAIAIRILSNGFVPLWAGVVITALDCFIFLFLENYGVRKLEALFAILIGIMALSFAWMFGEAKPDGLDILLGLLVPKLSSKTIQQAVAVVGCIIMPHNVFLHSALVQSRHIDSTKKGRVQEAVNYYTIESTVALAVSLVINIFVTTVFAKGFYGTEIANSIGLENAGQYLQQKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWVRALITRSCAIIPTIIVALVFDTSEDSLDVLNEWLNILQSVQIPFALIPLLCLVSKEQLMGTFKIGIVLKIISWFVAALVIVINGYLLVEFFSSEVNGPVIGTIVSVFTILYVAFIVYLASRMITFLPWQRFSQTKMNTNTELTS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0204 517 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 54 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 Hamap Divalent metal cation transporter MntH [mntH]. 42 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 PRINTS Natural resistance-associated macrophage protein signature 165 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 PRINTS Natural resistance-associated macrophage protein signature 346 365 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 PRINTS Natural resistance-associated macrophage protein signature 408 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 PRINTS Natural resistance-associated macrophage protein signature 374 391 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 PRINTS Natural resistance-associated macrophage protein signature 190 211 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 PRINTS Natural resistance-associated macrophage protein signature 135 161 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 PRINTS Natural resistance-associated macrophage protein signature 239 262 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 Pfam Natural resistance-associated macrophage protein 77 438 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi10g0204 517 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 493 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0204 Mibi-ChrMibi10 3446762 3449678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0204 6 501 Inorganic Solute Cotransporters AT2G23150 78.672 0.0 780
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1784 12 33977399 33980363 Mibi10g0204 10 3446762 3449678 CCT
Mibi10g0204 10 3446762 3449678 Mibi10g0204 10 3446762 3449678 ECH