LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi10g0196	ATGGAACCTCCTCATATCTCCTCCATGTTTCCTTTCCTTCTCCTCCTCCTTCTTCTTCAACAATCATTCCCCATTTCTTCATCCTATACTTTCCCTCAAAAGTATTTCATCAATTGTGGTTCTGATTCCGACATAAACTCCGGCAACGGTCAAATTTTCTCTGGCGACTGCTTTTCGAAGCACAATTCCTTCGTGACGGACTTTAATAAATCGTCGACCACACCTCCTCTGTATCGAACCGCAAGAATCTTTCACGTTCCCTCTGGTTACAAGTTCACAATCGGTGAAAACGAAAGAGGTTATTATATGGTACGTCTCCATTTCTATGCTTTCTCTGATCCACAAAAACTATCTACGGCTCGATTCAATGTTTCTAGTTTGGGGTTTTGGTTGTTGGAAAATTTCAGTGTTGAAAATCGAACAAACACTCTGATTATAACGGAGTTTTATCTCAACGTTGTTAATAGTAGCTTGAGAATCGATTTTTTCCCTGTGGAATCACAATTCGCGTTTGTGAATGCCATTGAATTGTTTCGTGTCCCTGATAAATTTATCCCAAATATGGCATCACATGTTACTAGCAAAGGAAATACCAGTGATTACAAGAACATTCTGTTCCATGTGTTACGTACGATTTACATGCTTGATGTTGGTGGTTCTGGGGAAACGTATGATGTCTTGAGGAGAAAATGGGAAAAAGATGATCAATATGCTAAAAATGGATCAAAGTTATTTAGCTCTGTTAATATTAAGTACCAAGTCGAGGAAGATAATAATGATGTATCGGAGGAAGATGGTGTGGATTCCACTAATGTTGTAGCACCAGAACTTGTTTACCAGACAGCTAGAGTGATGACTAAAGATTCTGGCAATACTGTCATATTTTTTAACACATCATGGGCTCTTAAGGTGAAGAGGAATGCTAGTTATTTCATGAGAGCTCACTTCTGTGACATTGCAAGTATGAGTGTTGGTCTTACTTTCTTCAATTTCTATATCTTCGACAACTTCAATTGGTCAGTCCCTACAAATTTGAGGGAGTCTTCTGTTCCTTTTTATCGTGATTTTGTTGTGGATTCTGATGATTCTGGAGATCTGAGGATCAGTGTTGGTCCTGATAAAGCTTCTGCTGTTAAAAATGCTTTCCTGAATGGTCTTGAAGTGATGGAAATCATTACAACTCCAGGTCCATCTGCAGAAGTGAACGACTACGAATGTAAGAAGAGTCATAAACATAATATTCATCATCTTGTTCTGAAGGTGGTGCTTGGATCATTATTGGCACTGATATGCATTATTATGGTGGTTGTGTTCTGTTTGATCCGGAAATGTTGGAAACAAAAGATTGGTAGAACTCTGGATTGGGCGCCACTTTCAGTTAAAGGAGGAGGAAGTTCACATGGCAAAAGAGGAAGCAGCCATGGATCATCTCTTGGCAACATAAAACTGGGACTCAAGATGTCTTTCAACGAGATTCAATCTGCAACAAACAATTTCCACAAGAAACGTATCATTGGGAAGGGAGGATTTGGAAATGTGTACAAGGGTATTCTCAAGAATGGTGTGGAAGTAGCTGTGAAGAGAAGTGATCCAGGTTCATCATCAGGTCAAGGATTCCCAGAATTTCAAACTGAGGTCACGGTCTTGTCCAGAATTCGCCATCGCCATCTTGTTTCCTTAATTGGGTATTGTGACGAGAGGTCAGAGATGATACTTGTGTATGAGTACATGGAAAAGGGAACACTAAGAGATCACTTGTACCATTCAAATCTCCCAAGCTTGACTTGGAAACAAAGGCTAGAAATCTGCATTGGGGCTGCAAGAGGTTTGAATTATCTTCATAAAGGAGCAGCTGGTGGAATCATTCATCGTGATGTGAAATCCACAAACATATTGCTCGACGAAAATCATGTTGCAAAAGTTGCTGATTTTGGCCTCTCAAAATCAGGTCCACTTGATCATGAACAACCATCTGTGACCACAGGTGTGAAAGGCACATTTGGGTATCTTGATCCTGAGTATTTCAGAACCCAACAGTTGACAGAAAAATCTGATGTTTACTCATTTGGGGTGGTTCTTCTGGAAGTTCTATGTGCAAGACCAGCTCTTGATTCTTCACTTCCATGGAACCAAGTGAACTTGGCTGAATGGGGAATGTTCTGCAAGCGAAGAGGGACATTGGAAGAGCTGATAGATCCGAGGATAAAGGACCAAATAGATCAAAACTCACTGAGGAAATTCAGTGAGACGGTGGGAAAATGTCTGGAAGAAGATGGGTGTGATAGGCCAGCGATGAGTGATGTATTGTGGGATTTGGAGTATTCTCTGCAACTTGAGAGAGGCGCGAGACAGAGGAACTCATCAAGAGAAGATCCTTCAAGTGGGGTTACAGTATCACTTGAACTGTCCAACGTAAGGCGTCTTCCTTCATTGTCAACACAAGCAGACTCAGAAGTTATGTCTATTTTGAACGATGATAGTGCTGCGCATTCTGTTTTCTCGCTGTCGAATGTTCACGGTGCCAGATAA	2529	0.4089	MEPPHISSMFPFLLLLLLLQQSFPISSSYTFPQKYFINCGSDSDINSGNGQIFSGDCFSKHNSFVTDFNKSSTTPPLYRTARIFHVPSGYKFTIGENERGYYMVRLHFYAFSDPQKLSTARFNVSSLGFWLLENFSVENRTNTLIITEFYLNVVNSSLRIDFFPVESQFAFVNAIELFRVPDKFIPNMASHVTSKGNTSDYKNILFHVLRTIYMLDVGGSGETYDVLRRKWEKDDQYAKNGSKLFSSVNIKYQVEEDNNDVSEEDGVDSTNVVAPELVYQTARVMTKDSGNTVIFFNTSWALKVKRNASYFMRAHFCDIASMSVGLTFFNFYIFDNFNWSVPTNLRESSVPFYRDFVVDSDDSGDLRISVGPDKASAVKNAFLNGLEVMEIITTPGPSAEVNDYECKKSHKHNIHHLVLKVVLGSLLALICIIMVVVFCLIRKCWKQKIGRTLDWAPLSVKGGGSSHGKRGSSHGSSLGNIKLGLKMSFNEIQSATNNFHKKRIIGKGGFGNVYKGILKNGVEVAVKRSDPGSSSGQGFPEFQTEVTVLSRIRHRHLVSLIGYCDERSEMILVYEYMEKGTLRDHLYHSNLPSLTWKQRLEICIGAARGLNYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSKSGPLDHEQPSVTTGVKGTFGYLDPEYFRTQQLTEKSDVYSFGVVLLEVLCARPALDSSLPWNQVNLAEWGMFCKRRGTLEELIDPRIKDQIDQNSLRKFSETVGKCLEEDGCDRPAMSDVLWDLEYSLQLERGARQRNSSREDPSSGVTVSLELSNVRRLPSLSTQADSEVMSILNDDSAAHSVFSLSNVHGAR	842

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi10g0196	842	SMART	serkin_6	499	775	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi10g0196	842	FunFam	Receptor-like protein kinase FERONIA	577	794	-	-
	Mibi10g0196	842	PANTHER	OS07G0166700 PROTEIN	486	779	IPR045272	GO:0004714\|GO:0006468
	Mibi10g0196	842	CDD	STKc_IRAK	505	773	-	-
	Mibi10g0196	842	ProSitePatterns	Protein kinases ATP-binding region signature.	505	527	IPR017441	GO:0005524
	Mibi10g0196	842	SUPERFAMILY	Protein kinase-like (PK-like)	486	770	IPR011009	-
	Mibi10g0196	842	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	621	633	IPR008271	GO:0004672\|GO:0006468
	Mibi10g0196	842	Gene3D	Phosphorylase Kinase; domain 1	468	576	-	-
	Mibi10g0196	842	Gene3D	-	209	392	-	-
	Mibi10g0196	842	Gene3D	-	34	180	-	-
	Mibi10g0196	842	Pfam	Malectin-like domain	37	390	IPR024788	-
	Mibi10g0196	842	Pfam	Protein tyrosine and serine/threonine kinase	500	769	IPR001245	GO:0004672\|GO:0006468
	Mibi10g0196	842	ProSiteProfiles	Protein kinase domain profile.	499	775	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi10g0196	842	FunFam	receptor-like protein kinase FERONIA	465	576	-	-
	Mibi10g0196	842	Gene3D	Transferase(Phosphotransferase) domain 1	577	794	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi10g0196	Mibi-ChrMibi10	3304680	3307208	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi10g0196	6	794	Receptor kinase-like Gene Family	AT2G23200	46.806	0.0	629

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mibi10g0196		Malectin_like	1.5e-25	CL0202