Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0191 ATGAACATGGTCATTGATAACAGGAAAGACATGGATCGGATCAAAGGTCCATGGAGTCCAGAAGAAGACGATGCCTTACAGAAGCTAGTAGAAAAGCACGGACCTCGAAACTGGTCTCTCATCAGCAAATCAATTCCAGGTAGATCCGGAAAATCTTGCCGTCTCCGATGGTGTAACCAGCTTTCTCCACAGGTCGAACACCGACCTTTCTCACCTGAAGAAGACGACACTATCATCCGAGCTCACGCCAGATTCGGCAACAAATGGGCCACCATAGCCAGACTCTTATCCGGTCGAACCGATAACGCCATCAAGAATCACTGGAATTCCACCTTGAAGCGCAAGTGCTCCTCCGTCATCATCGACGACTCCGCCGCCGGCGACGGCAGTTTCAGCCCTCAGCCGCCGCTGAAGAGATCGGTGAGTGCCGGCGCCGCGATTCCGGTTTCGACCGGGTTCTACGTTAGCTCACAGACTCCGAGCAGCCCGTCGGGGTCTGACGTAAGCGATTCGAGCGTTCCGGTGGCTTCGTCGTCGCATGTTTACCGGCCGGTGGCGAGAACCGGCGGAATTCTACCACCTCCGGTGGAAACGACGTCGTCGTCGAATGAGCCGACGACTTCATTGTCCCTATCGCCTCCCGGAGTGGACTCCTCGGAGGTATCGAATCGTGCTTCGGAATCGGCGGTGGCTAACGCCGCGGCGGTGCGTATGTTGCCGGCAATGGTTTCCGCCGCCGTGGCTCCGCCGATGCCTATGTCGGTGGTGCAGCATCAGGTTCAATTAGGCCTTGGGGATCGGAGGAATGGCGATGGCGGCAGTGGGGCCGGGGCGTTTAATTTCAGTGCGGAGTTGATGGCTGTGATGCAGGAGATGATAAGAACAGAGGTGAGGAGTTATATGGCGGGATTAGAGAAGAGGCAGCTCATGGATTTGGGAACGCTTCAGTGA 951 0.5626 MNMVIDNRKDMDRIKGPWSPEEDDALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSVIIDDSAAGDGSFSPQPPLKRSVSAGAAIPVSTGFYVSSQTPSSPSGSDVSDSSVPVASSSHVYRPVARTGGILPPPVETTSSSNEPTTSLSLSPPGVDSSEVSNRASESAVANAAAVRMLPAMVSAAVAPPMPMSVVQHQVQLGLGDRRNGDGGSGAGAFNFSAELMAVMQEMIRTEVRSYMAGLEKRQLMDLGTLQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0191 316 MobiDBLite consensus disorder prediction 155 224 - -
Mibi10g0191 316 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi10g0191 316 SMART sant 66 114 IPR001005 -
Mibi10g0191 316 SMART sant 14 63 IPR001005 -
Mibi10g0191 316 FunFam Transcription factor MYB44 69 115 - -
Mibi10g0191 316 Gene3D - 68 126 - -
Mibi10g0191 316 FunFam MYB transcription factor 15 66 - -
Mibi10g0191 316 Gene3D - 14 66 - -
Mibi10g0191 316 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi10g0191 316 MobiDBLite consensus disorder prediction 1 20 - -
Mibi10g0191 316 MobiDBLite consensus disorder prediction 194 224 - -
Mibi10g0191 316 MobiDBLite consensus disorder prediction 155 178 - -
Mibi10g0191 316 Pfam Myb-like DNA-binding domain 18 76 - -
Mibi10g0191 316 CDD SANT 17 59 IPR001005 -
Mibi10g0191 316 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Mibi10g0191 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 65 IPR017930 -
Mibi10g0191 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 116 IPR017930 -
Mibi10g0191 316 PANTHER MYB PROTEIN-RELATED 15 197 - -
Mibi10g0191 316 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0191 Mibi-ChrMibi10 3217498 3218448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0191 8 306 MYB Transcription Factor Family AT4G37260 55.116 8.39e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi10g0191 Myb_DNA-bind_6 3.4e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1698 08 33708106 33710769 Mibi10g0191 10 3217498 3218448 ECH
Mibi10g0191 10 3217498 3218448 Mibi10g0191 10 3217498 3218448 ECH