Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0190 ATGATCAAAAGCCATAGTTTCCAAATCTTGGTAACACCACCTGTATGTCCAGTAGTCGCAAAAGATGCTATTCTTCCATCACTTTACCAGTACCTTCCTGCTATCCCAATTAACTATTTCTGTTTTCCCCTTCCTCCTTCATTATTTAGCTCTTCCCTTCCCTCTTCTTTTGGCTACTTCTCTCATTTTGGTCACCTGTCTCTGTTCTTCCTTCCTTCTTTTTGTTTCCCTTCTGTTACATCACAAGTCTCATCCTCCCCCTCTCTTTTTCCCTCAAGAGATGTTGGTGTGGGATCACTCTTTGAAACCATGAATCTTCTCTTGAGATTTTTCCCACTTGTTTTTCTTCTCATTCTTGATGTTAATCCATGCTTTGGATTAAACAAAGATGGTGTCTCATTGCTCTCTTTGAAGTACTCTGTTTATAGTGATCCTCTGTTTGCCTTTGGAAACTGGAATTCCTTGGACGATACTCCTTGTTCTTGGAAAGGAGTTCAATGTGAAGCTGTTTCATATGCAAATAATTCTTCTCAGAATCGAGTGGTTGGTTTGTCTCTTCCGAACTCTCAGCTTCTTGGCTACATCCCCAACGATCTTGGTTCGTTAGAAAATCTCCAAAGACTCGACCTTTCTAACAATTCTCTCAATGGGTCACTTCCTTCTTCACTTTTTCAGTCTCCTTCAAATCTCGAGTTTCTTGATTTGTCTAACAATTTGATCTCCGGCGAGATTCCTGATTCCATAGTACAGCTCACTAATCTTGCTGTTCTTAACCTCTCTGACAATGCATTGGCCGGGAAAATCCCCAACAATCTTGGAAATGTGCAGAATCTAACTGTTTTGTCGGTGAGGAATAACTACTTATATGGTTTTCTTCCAAGTGGTTTTAGAAAGGCACAATCTTTAGATCTATCTTCAAACTTGTTGAACGGATCTCTCCCTTCGGATTTCGGTGGGGACAGTTTGAGATTCTTGAACATCTCATTCAACAAATTCTCCGGCGAAATCCCACCAAAATTCGCAGATAAAATCCCGACCAACGCCACCGTTGACCTCTCATTCAACAATCTCTCCGGCGAGATTCCAGATTCCTCTGTTTTCACGAACACAGATTCCAATTCACTTTCCGGGAATCCCGATCTTTGCGGCGAAGAAACCGGTAACCCATGTCCAGTTTCATCGCCACCATCTCCCACAGCTTCTCCCATTTCTCCGCCGGCGTTCGCCGCATTTCCGAAGTCGCTCGATTCTCAGGCGCCGGAATATGGACACGTCACTTCCCGGCGAGAAAAATCAGGAATCAGAAGAGGAACAATCATAGGAATCGTAATAGGAGACATCATAGGAATTGGGTTATTAGCTTTGATAATCCTTTACATGTACCAATCAAAAAGAAGAAAGAACAACACGGAGGATCCACTGAACAAAGAACATATCAATGGGTTATCATCATTATCACCATCTTCCTCTGAATCAAGAGGGTTCAGAACATGGTCATGCCTGAGGAAAAAAACCGAACAAGATGAAGAAGAAGGAGAATCTGCATCAGAATCTAGAAACTCTTTTGATAATGAAATGGAAGATCAAAATGGGTTTCAGAGACAAGAAGAATCTTCTTCAGAGAAGAAAACAGGGATGTTAGTTACAGTGGATGGAGAGAAAGAGATGGAGCTGGAAACACTTCTAAAGGCTTCGGCTTTCATATTGGGAGCTACAGGTTCAAGCATAATGTACAAGGCGGTTCTTGAAGACGGCACGGTGTTGGCGGTTCGGAGAATCGGTGAGACCGGTTTAGGCCGGTTCAAGGATTTCGAGTCACAGGTCAGAATTGTAGCTAAACTGGTTCATCCAAACCTGGTTCGGGTTCGAGGATTCTACTGGGGAAATCAAGAGAAGCTTATCATCTACGACTTCATCCCTAATGGTAGTCTCGCCAATGTTCGTTACAGGAAAGTGGGTTCCTCGCCTTGCCATGTGCCTTGGGAAATTAGGCTGAAGATTGCTAGAGGGGTGGCACGTGGGTTGGCTTACCTCCATGACAAGAAGCACGTGCATGGAAATCTTAAGCCCAGCAACATTCTCTTGGGCAATGATATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAAGATTGTCACAGGAGATGCCAGTTATAAGTCAGGCGGGTCGGCCCGTATATTCGGCAGCAAGAGATCCACAGCCTCACGGGATAGCTTCCATGATGTTAACTTTGGGCCTAGCCCGAGCCCGAGCCCAAGTTCGATTGCCGGTGTTTCTCCTTACCATGCGCCGGAGTCGTTCAGAAACTTGAAGCCTCACCCAAAGTGGGATGTTTACTCGTTTGGGATCATATTTTTGGAGCTAATCACAGGAAAGATTGTGGTCACTGATGAGATGGGCCAAGGCCCAGGGCTGATAGTGGAGGATAAGAACCGGGCCATGAGGATGGCTGATGTGGCGATCCGTGCTGACATGGAGGGTAAAGAGGAGGCCTTATTGGCTTACTTCAAATTAGGGTACAGTTGTGTGTCAAGTGTCCCACAGAAAAGGCCATCCATGAAAGAAGTGTCGTATGCTCTTGATAGAATCACAGGCTCCTTTTCTTCTTCATCGTGCACTTATTATTATGGTCACTAA 2637 0.4456 MIKSHSFQILVTPPVCPVVAKDAILPSLYQYLPAIPINYFCFPLPPSLFSSSLPSSFGYFSHFGHLSLFFLPSFCFPSVTSQVSSSPSLFPSRDVGVGSLFETMNLLLRFFPLVFLLILDVNPCFGLNKDGVSLLSLKYSVYSDPLFAFGNWNSLDDTPCSWKGVQCEAVSYANNSSQNRVVGLSLPNSQLLGYIPNDLGSLENLQRLDLSNNSLNGSLPSSLFQSPSNLEFLDLSNNLISGEIPDSIVQLTNLAVLNLSDNALAGKIPNNLGNVQNLTVLSVRNNYLYGFLPSGFRKAQSLDLSSNLLNGSLPSDFGGDSLRFLNISFNKFSGEIPPKFADKIPTNATVDLSFNNLSGEIPDSSVFTNTDSNSLSGNPDLCGEETGNPCPVSSPPSPTASPISPPAFAAFPKSLDSQAPEYGHVTSRREKSGIRRGTIIGIVIGDIIGIGLLALIILYMYQSKRRKNNTEDPLNKEHINGLSSLSPSSSESRGFRTWSCLRKKTEQDEEEGESASESRNSFDNEMEDQNGFQRQEESSSEKKTGMLVTVDGEKEMELETLLKASAFILGATGSSIMYKAVLEDGTVLAVRRIGETGLGRFKDFESQVRIVAKLVHPNLVRVRGFYWGNQEKLIIYDFIPNGSLANVRYRKVGSSPCHVPWEIRLKIARGVARGLAYLHDKKHVHGNLKPSNILLGNDMEPKIGDFGLEKIVTGDASYKSGGSARIFGSKRSTASRDSFHDVNFGPSPSPSPSSIAGVSPYHAPESFRNLKPHPKWDVYSFGIIFLELITGKIVVTDEMGQGPGLIVEDKNRAMRMADVAIRADMEGKEEALLAYFKLGYSCVSSVPQKRPSMKEVSYALDRITGSFSSSSCTYYYGH 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0190 878 Pfam Protein kinase domain 569 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0190 878 SUPERFAMILY Protein kinase-like (PK-like) 568 863 IPR011009 -
Mibi10g0190 878 FunFam Leucine-rich repeat receptor-like protein kinase 127 294 - -
Mibi10g0190 878 MobiDBLite consensus disorder prediction 368 407 - -
Mibi10g0190 878 MobiDBLite consensus disorder prediction 497 545 - -
Mibi10g0190 878 SMART LRR_typ_2 275 298 IPR003591 -
Mibi10g0190 878 SMART LRR_typ_2 202 226 IPR003591 -
Mibi10g0190 878 SMART LRR_typ_2 251 274 IPR003591 -
Mibi10g0190 878 Pfam Leucine rich repeat 204 264 IPR001611 GO:0005515
Mibi10g0190 878 Pfam Leucine rich repeat N-terminal domain 128 167 IPR013210 -
Mibi10g0190 878 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Mibi10g0190 878 FunFam Leucine-rich repeat receptor-like protein kinase 298 392 - -
Mibi10g0190 878 PRINTS Leucine-rich repeat signature 251 264 - -
Mibi10g0190 878 PRINTS Leucine-rich repeat signature 205 218 - -
Mibi10g0190 878 MobiDBLite consensus disorder prediction 469 545 - -
Mibi10g0190 878 ProSiteProfiles Leucine-rich repeat profile. 229 251 IPR001611 GO:0005515
Mibi10g0190 878 Gene3D Phosphorylase Kinase; domain 1 528 638 - -
Mibi10g0190 878 MobiDBLite consensus disorder prediction 475 496 - -
Mibi10g0190 878 Gene3D Ribonuclease Inhibitor 127 296 IPR032675 -
Mibi10g0190 878 ProSiteProfiles Protein kinase domain profile. 563 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0190 878 MobiDBLite consensus disorder prediction 391 405 - -
Mibi10g0190 878 SUPERFAMILY L domain-like 133 383 - -
Mibi10g0190 878 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 181 862 - -
Mibi10g0190 878 Gene3D Transferase(Phosphotransferase) domain 1 639 872 - -
Mibi10g0190 878 Gene3D Ribonuclease Inhibitor 297 392 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0190 Mibi-ChrMibi10 3142779 3145884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0190 106 878 Receptor kinase-like Gene Family AT4G37250 57.143 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi10g0190 Pkinase 3.7e-29 CL0016