Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0189 ATGGCTCTCACTAAGGATACCCAGAACTCGATGTTCATTGACGCGCTTCTCTGTGATGAAGATGGTTTTACAGATGATGTTTCTGAAGGAGAGAGTTATGGCGAAAAGTTTCCATCTTTACCTTTGACTTTGTCGGACAATAATGTTTTTTTCTTCGACGATGACCATGATTGTCTTGCCTCTCTAATCTCAAAAGAAAGAGGGACCCATTTTGGTTTCGGTAATGCAGTAATGATCGACGATGAGCCTCTATTAAAAGAAGCTCGTCAAGAGGCTGTGTTCTGGGTTTTAACGATTTGTGCTCGCCATGATTTCTCTGCTCTCACCTCTGTTCTTGCTGTGAACTACTTCGATCGGTTCATCCAAAGTCTAAACTTCCTGCGAGATAAGCCATGGATGACACATCTTGCTGCTGTTGCTTGTTTAAATGTAGCTGTAAAAATGGAGGATTCCCAAGTTTCACATCTCTTGGACCTTCAAGTTGAGGGATCCAAGTACGAATTCGAAGCGAAACATATAAAGAGAATGGAGATTCTAGTGTTATCAACTCTTCAATGGAGGATGAATCCTGTGACTCCAATCTCGTTCTTTGGACATATTGCGAGAATACTCCGTATAAAGAGCCACTTGCATTGTGAATTCCTCTCGCGATGGGAACGTGTTCTGCTTTTGGTCCTTCCGGATGCAAAGGTCATGAGTTATCTTCCTTCCATAATAGCTGCTGCTACAATGGTCCATGTTATTCGAGAGTTTGAACCGTTTAATGTGGTTGAATACAGAAGCCAGCTTGTGGCTTTACTCAAAATCAGCGGGGAACAAGTGAACCAGTGCTACAAATTTGTTCTGAAAGTACTATGTTGTCACCAAGACATTCAAAATCTTCATAGCAGATGCAAACGCCTGTGTGAACCGAGAAGCCCTGATGATGTGATCGATGCTTTCTTTAATAATGATAGTTCAAATGATTCGTGGGCCTCAGGAACAGTTTCAGCATCGGAGGAGCCTGTGTTGAAGAAGAACCGATCTCAGGAAACAGGCTATTGA 1044 0.4243 MALTKDTQNSMFIDALLCDEDGFTDDVSEGESYGEKFPSLPLTLSDNNVFFFDDDHDCLASLISKERGTHFGFGNAVMIDDEPLLKEARQEAVFWVLTICARHDFSALTSVLAVNYFDRFIQSLNFLRDKPWMTHLAAVACLNVAVKMEDSQVSHLLDLQVEGSKYEFEAKHIKRMEILVLSTLQWRMNPVTPISFFGHIARILRIKSHLHCEFLSRWERVLLLVLPDAKVMSYLPSIIAAATMVHVIREFEPFNVVEYRSQLVALLKISGEQVNQCYKFVLKVLCCHQDIQNLHSRCKRLCEPRSPDDVIDAFFNNDSSNDSWASGTVSASEEPVLKKNRSQETGY 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0189 347 Pfam Cyclin, C-terminal domain 191 288 IPR004367 -
Mibi10g0189 347 FunFam D6-type cyclin 76 189 - -
Mibi10g0189 347 Gene3D - 190 279 - -
Mibi10g0189 347 SUPERFAMILY Cyclin-like 46 189 IPR036915 -
Mibi10g0189 347 SMART cyclin_7 94 182 IPR013763 -
Mibi10g0189 347 PANTHER CYCLINS 78 281 IPR039361 -
Mibi10g0189 347 Pfam Cyclin, N-terminal domain 77 189 IPR006671 -
Mibi10g0189 347 MobiDBLite consensus disorder prediction 320 347 - -
Mibi10g0189 347 SUPERFAMILY Cyclin-like 174 293 IPR036915 -
Mibi10g0189 347 CDD CYCLIN 89 181 IPR013763 -
Mibi10g0189 347 Gene3D - 84 189 - -
Mibi10g0189 347 SMART Cyclin_C_2 191 304 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0189 Mibi-ChrMibi10 3139486 3140807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0189 1 344 Core Cell Cycle Gene Families AT5G67260 42.896 7.46e-82 253
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0189 10 3139486 3140807 Mibi12g1803 12 34238374 34239809 CCT
Mibi12g1803 12 34238374 34239809 Mibi10g0189 10 3139486 3140807 ECH
Mibi08g1696 08 33661050 33662425 Mibi10g0189 10 3139486 3140807 ECH
Mibi10g0189 10 3139486 3140807 Mibi10g0189 10 3139486 3140807 ECH