Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0185 ATGGAGCCAGCATCAGAGGATTTATCGTCTCAACCTACTAATTCAGCTCCCAATATTGAGCATCATTCCACCGATGTTTCTGGACATCATGACAGTGCTCATAACTCTGTGTCTTCATTGTCGGCTGATGACACATCATCCTCAGTGACGAATCTGAAAGTTTCAGAGTCCTTTGGAGCAAGACAAGGGAATTCCCAGACTGGAGATACTAGGATGTCAAATTTTTCTTTCCTTACCAGTGGGATTGGACGAATGCTATCAATTCCTTCTGTACGAAATGAGACTGGTCCTGTCAATTCAGGAGCCGAGAAGCCTAATGTAATTGAATCATTTGCCAAAGGGTTATTTGACTCATCAAAGACTGCAGTAAAGAAAATGCAGGTGACGGCACGCCATATTGTTTCTCAAAACAAACATAGATACCAGGATGGAGAGTTCGATTTGGATTTGGCATACATTACTGAAAATATTATCGCTATGGGTTTTCCGGCTGGTGATTCCAGCTCTGGAGTTTTCGGATATATTGAGGGTTTCTATCGCAATCACATGGAAGAAGTGATTAGATTTCTTGAGACTCGTCATGAGGGAAAGTACAAAGTATACAATCTTTGCTCAGAGAGGTTGTATGATGCATCACTATTCATGGGGAAGGCTGCAAGTTTCCCATTTGATGATCATAACTGCCCTCCTATTGAACTTATAGCATCATTTTGTAGAAGTGCTTATTCATGGTTAAAGGAGGATATTCAAAATGTGGTAGTTGTTCATTGCAAAGCTGGGATGGGGAGGACAGGGGTGATGATTTGTAGCCTTCTTTTATTTCTTAAGTTCTTCCCAACTGCTGAGGAGGCCATTAATTTCTTTAACCAGAAAAGATGCATTGATGGGAAAGCATTAGTTCTTCCCAGTCAGATTAGGTATGTCAAATACTTCGATCGGACTTTAACAGACTTCAAAGGAGAAGTTCAGCCTGGACGGAGGTGCATGCTAAGAGGATTTCGGCTTCACAAATGCCCTTATTGGATTAGGCCTTCCATTACGATTTCCAATCATAAGGGAATTCTTTTCACCACAAAAAAACATCCAAAAACAAAGGATCTTTTGCCAGAAGATTTTTGGATCAGTGCTCCGAAGAAAGGAATTGTGATATTTGCATTACCTGGGGAACCTGGTCTAACGGAGTTGGTTGGGGACTTCAAAATTCATTTTCATGATGGACAGGGAGATTTTTACTGTTGGTTAAATACAACCATGACAGAGAACAGAAAAATCTTGAGCACCGCAGATCTTGATGGTTTTGACAAGAGAAAGATCCCTGCTCCAGGATTTCAGGTTGAAGTAGTAACGGCAGACTATAACGGCACCCTACCTGTTTGGACAAAATCCAATCCCACCAGCAAAGGATCTAGTGGTACCTCAGGCAATGTCGCAGCCTCAGATTCAAGAAAGAGTAAGGTTTCTACAAATGGGGATGATGATGTGTTCTCAGATAGTGAAGGAGAAGAAACCCAAGATTCAAAGAACAGGGAATCTAAAGCTGCATCTGATTTCAGCTACGGGGAATGTCATCAAGTGTCTGATGCCGCTAAAGACCATGTTGTAGCTGTGACCTCGGGGACAAAGCAGCTGTCACTTCAGCATCAAGAACGTGTAAAGAATAATGCTTCCGAAGAAGGATCAAATAGTCCGAAATCCCAGAAAACTCCCAAGACCCCTCGAAAGGACTACGCCCGGGCAAATGAGATCAAGGCCATGGCAGCCGATGCATCAGTTTTTTCTTTTGGAGATGATGAAGATTTTGAGAGCGACTGA 1812 0.4233 MEPASEDLSSQPTNSAPNIEHHSTDVSGHHDSAHNSVSSLSADDTSSSVTNLKVSESFGARQGNSQTGDTRMSNFSFLTSGIGRMLSIPSVRNETGPVNSGAEKPNVIESFAKGLFDSSKTAVKKMQVTARHIVSQNKHRYQDGEFDLDLAYITENIIAMGFPAGDSSSGVFGYIEGFYRNHMEEVIRFLETRHEGKYKVYNLCSERLYDASLFMGKAASFPFDDHNCPPIELIASFCRSAYSWLKEDIQNVVVVHCKAGMGRTGVMICSLLLFLKFFPTAEEAINFFNQKRCIDGKALVLPSQIRYVKYFDRTLTDFKGEVQPGRRCMLRGFRLHKCPYWIRPSITISNHKGILFTTKKHPKTKDLLPEDFWISAPKKGIVIFALPGEPGLTELVGDFKIHFHDGQGDFYCWLNTTMTENRKILSTADLDGFDKRKIPAPGFQVEVVTADYNGTLPVWTKSNPTSKGSSGTSGNVAASDSRKSKVSTNGDDDVFSDSEGEETQDSKNRESKAASDFSYGECHQVSDAAKDHVVAVTSGTKQLSLQHQERVKNNASEEGSNSPKSQKTPKTPRKDYARANEIKAMAADASVFSFGDDEDFESD 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0185 603 CDD PTP_PTEN 149 313 IPR045101 GO:0016791
Mibi10g0185 603 Gene3D Protein tyrosine phosphatase superfamily 124 321 IPR029021 -
Mibi10g0185 603 ProSitePatterns Tyrosine specific protein phosphatases active site. 255 265 IPR016130 GO:0016311|GO:0016791
Mibi10g0185 603 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 253 292 IPR000387 GO:0016311|GO:0016791
Mibi10g0185 603 MobiDBLite consensus disorder prediction 459 518 - -
Mibi10g0185 603 ProSiteProfiles C2 tensin-type domain profile. 325 452 IPR014020 -
Mibi10g0185 603 MobiDBLite consensus disorder prediction 459 484 - -
Mibi10g0185 603 Pfam Protein-tyrosine phosphatase 225 277 IPR000242 GO:0004725|GO:0006470
Mibi10g0185 603 MobiDBLite consensus disorder prediction 538 576 - -
Mibi10g0185 603 MobiDBLite consensus disorder prediction 1 72 - -
Mibi10g0185 603 MobiDBLite consensus disorder prediction 30 72 - -
Mibi10g0185 603 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 117 570 - -
Mibi10g0185 603 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 124 321 - -
Mibi10g0185 603 SMART PTEN_C2_2 323 451 IPR014020 -
Mibi10g0185 603 MobiDBLite consensus disorder prediction 1 22 - -
Mibi10g0185 603 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 152 315 IPR029021 -
Mibi10g0185 603 ProSiteProfiles Phosphatase tensin-type domain profile. 139 318 IPR029023 -
Mibi10g0185 603 MobiDBLite consensus disorder prediction 500 516 - -
Mibi10g0185 603 MobiDBLite consensus disorder prediction 538 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0185 Mibi-ChrMibi10 3087427 3094339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0185 27 603 Protein tyrosine phosphatase (PTP) family AT3G19420 60.434 0.0 715