Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0178 ATGGGAGCTCACAGTCACCACTCCTCCCTCCCAATTCTTCTTCTTCATCATCATCATCTCTCAATGCCTCATTCCAAAACCCTCTTCTTCTTCTTCACTCTCATCACCACGGTCTTCTCCGACCAACCTCCTCCATCAACCACCTCGGACGGCGTCGCACTGCTCTCCTTCAAATCGAAAGCGGACCTGGACAACAAACTACACTTCAACCCCTCCGTCCATTTCTGCAAATGGGAAGGCGTGAAATGCTCGCAGGGCAGAGTGATCCGGTTGTTCCTCCCAAACTGCTCCCTCCGAGGCACCTTCCCTCCCAACTCCCTCTCCCTCCTCCCCCACCTCCGCACCCTCTCCCTCTCCAACAACTCCCTCCACGGCCCCCTCCCTCCCCTCCCCCCCCTCCTCCACCTCCATTCCCTCCTCCTCCACCACAACCTCTTCTCCGGCCCCATCCCCCCTCACCTCCTCCGGTTCGACCGCTTGTTCTCCCTCCGTCTCGACTCGAACCGGTTCAACGGAACCCTCCCTCCTTTCAACCAGTCCACCCTTCTCTTCTTCAATGTCTCCTCTAACAACCTCTCCGGTCCCATCCCGGTGACCGTCACTCTCTCTCGCTTCAAAACGACGTCGTTTTTGGAGAACCCTGGCCTCTGCGGGGAAGTCATTCACAAAGCTTGTGACTTTCCTTCTCCTTCTCCTTCTCCTTCTTCGGACAATAATTCCTCTGTGTATTTGGGGCAGAGCGCTGAATCAGAAGGCAATGTTGTTGTTTCTTCCGTTAATTTCAAGAAGCACAAGAGTAGTGATAATAATAATAATAATAATGGCTTGATTCTTGGCTCCACCATTGGTGCTTCGATTTTGTTCGCCTCTTTCCTGGGGTTTATCGCCCTGGTTAAGAAACGGCGGAGTGATTTGAAAACCCCAAAAATGGATTCGCCCGCGGTGGAAGTTATGGATTCTAAAATTGAGGGAATCGATGGAGGTGATCAACATCATCATCATCATCATCATTGTCGTCGTAATTTGGTGTTCTGTTGTGGTGAGGAACAATTGTGTACGCTGGACCAGTTGATGGGAGGTTCGGCTGAGTTACTAGGAAGGGGTAGTATTGGGACTACGTATAAGGTTGTGGTGGATGGGAGGTTGAGTTTGACAGTGAAGAGGCTTGATGCTGGGAAGATTGCAAGAACAAGTGGGGAATTGTTTGAGAGGCATATGGAAATGGTGGGTCAGCTTCGGCATCCTAATTTAGTACCCGTTAGAGCTTATTTTCAGGCTGAATCAGAGAGGCTTGTGATCTTTGATTATCAGTCTAATGGCAGCTTATTCAACCTCATTCATGGATCAAGATCAGCAAGAGCGAAGCCTCTTCACTGGACATCATGCTTAAAGATAGCTGAAGACATCGCTCATGGACTTGCATATATACACCAAACATCAAGATTAATCCACGGCAACCTAAAGTCCTCTAATGTCCTTCTTGGAGTGGACTTTGAAGCTCGTGTAACAGACTATAGTTTGTCCCTCCTTGCAGACTCTTCATCCAGTGATGATCCTGATTCTGCTGCCTATAAAGCACCTGAAACTCGCAACACTAATCGCCCACCAACTTCTAAATCTGATGTCTATACCTATGGGGTGCTTCTACTAGAGCTTCTAACTTCCAAATATGCTTCTCAGCATCCCTTCCTTGTGCCTATGGATTTGCAGGATTGGGTGAGAGCAATGAGGAATGATTATGGTGCTGAGGATAAGCAGCTAGGAATGCTCACGGAGGTTGCAAGTATTTGCACTGTTATATCACCTGAACAGAGACCAGCTATGCGGCAAGTCTTGAAGATGATACAGGAAATCAAAAAGAGTGTAACTCTTGAAGGTAATACATCTACTGGGTTTTCATAG 1902 0.4853 MGAHSHHSSLPILLLHHHHLSMPHSKTLFFFFTLITTVFSDQPPPSTTSDGVALLSFKSKADLDNKLHFNPSVHFCKWEGVKCSQGRVIRLFLPNCSLRGTFPPNSLSLLPHLRTLSLSNNSLHGPLPPLPPLLHLHSLLLHHNLFSGPIPPHLLRFDRLFSLRLDSNRFNGTLPPFNQSTLLFFNVSSNNLSGPIPVTVTLSRFKTTSFLENPGLCGEVIHKACDFPSPSPSPSSDNNSSVYLGQSAESEGNVVVSSVNFKKHKSSDNNNNNNGLILGSTIGASILFASFLGFIALVKKRRSDLKTPKMDSPAVEVMDSKIEGIDGGDQHHHHHHHCRRNLVFCCGEEQLCTLDQLMGGSAELLGRGSIGTTYKVVVDGRLSLTVKRLDAGKIARTSGELFERHMEMVGQLRHPNLVPVRAYFQAESERLVIFDYQSNGSLFNLIHGSRSARAKPLHWTSCLKIAEDIAHGLAYIHQTSRLIHGNLKSSNVLLGVDFEARVTDYSLSLLADSSSSDDPDSAAYKAPETRNTNRPPTSKSDVYTYGVLLLELLTSKYASQHPFLVPMDLQDWVRAMRNDYGAEDKQLGMLTEVASICTVISPEQRPAMRQVLKMIQEIKKSVTLEGNTSTGFS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0178 633 FunFam Leucine-rich repeat receptor-like protein kinase 135 227 - -
Mibi10g0178 633 ProSiteProfiles Leucine-rich repeat profile. 112 134 IPR001611 GO:0005515
Mibi10g0178 633 SUPERFAMILY Protein kinase-like (PK-like) 363 620 IPR011009 -
Mibi10g0178 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 29 620 - -
Mibi10g0178 633 Gene3D Ribonuclease Inhibitor 47 227 IPR032675 -
Mibi10g0178 633 Gene3D Phosphorylase Kinase; domain 1 360 436 - -
Mibi10g0178 633 Pfam Protein kinase domain 363 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0178 633 Gene3D Transferase(Phosphotransferase) domain 1 438 629 - -
Mibi10g0178 633 MobiDBLite consensus disorder prediction 512 538 - -
Mibi10g0178 633 SUPERFAMILY L domain-like 53 215 - -
Mibi10g0178 633 ProSiteProfiles Protein kinase domain profile. 359 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0178 Mibi-ChrMibi10 3054176 3057238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0178 49 624 Receptor kinase-like Gene Family AT3G50230 49.601 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi10g0178 Pkinase 3.6e-29 CL0016