Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0172 ATGGAAGCTGAACATGGAGCTAAGAAGAGAGGGATGGAAGGAGAGAGAAGATACAAAGGGATCAGGATGAGGAAGTGGGGAAAATGGGTCGCTGAAATTAGAGAACCCAACAAACGTTCTCGTATTTGGCTCGGTTCTTATTCCACCGCCGTCGCCGCCGCCAGAGCCTACGACACCGCCGTCTTCTACCTCCGAGGTCCCTCCGCCCGCCTCAATTTCCCCGAACTCCTCGCCGGAGAGCCCTGCCTCGCCGCCGCCGCCGCCGGCGACTTGTCCGCCGCATCGATTCGGAAGAAAGCCATCGAAGTCGGCGCTCGGGTCGATGCCCTTCACGCCTCTCACCACCACCACCTCCGCCGCCTACCGTCGCCGGAGCCGCCGGAGCTCATGGCTCGCGGCGCCGTTGACCTGAACAAGATGCCGGAACCGGAGAATCCGGAGTGCAATTGA 450 0.6133 MEAEHGAKKRGMEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTAVAAARAYDTAVFYLRGPSARLNFPELLAGEPCLAAAAAGDLSAASIRKKAIEVGARVDALHASHHHHLRRLPSPEPPELMARGAVDLNKMPEPENPECN 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0172 149 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Mibi10g0172 149 FunFam Ethylene-responsive transcription factor 2 16 75 - -
Mibi10g0172 149 Gene3D AP2/ERF domain 16 75 IPR036955 GO:0003700|GO:0006355
Mibi10g0172 149 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Mibi10g0172 149 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 7 146 - -
Mibi10g0172 149 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Mibi10g0172 149 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
Mibi10g0172 149 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Mibi10g0172 149 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Mibi10g0172 149 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0172 Mibi-ChrMibi10 2961228 2961677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0172 12 145 AP2-EREBP Transcription Factor Family AT3G50260 64.234 2.78e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi10g0172 AP2 2.5e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1815 12 34407484 34408035 Mibi10g0172 10 2961228 2961677 CCT
Mibi10g0172 10 2961228 2961677 Mibi10g0172 10 2961228 2961677 ECH