Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0168 ATGTGGGATCTAAACGGCTCGCCTGATCACATAAACGACGACGAATCAGAGGGCTGTTCTTCTCTGAACGATGATAAAGGCAAAAGGGTCGACGGATCTGTTTCCAATTCAAGTTCCTCCGCCGACGACGACGGCGACGGCAGCCGTGGAAAAGACACCAACAAGAAGAGAAGCAGCAAAATCTTCGGATTCTCTTTCACCCATGAAAATTTTTCATCCATGGACAGTGCAGAAGCTGAAGCTGAAGTACTTCCGGTAACCAGACAGTTCATGCCGGTGGACGACGACGGCGCCGGCCCCACCGCCAGGTCATCCTTTCATGGGCCCCACTGGACAGGCCTGAAATCCAGCCAATCAGAAGTTAACGGCGTCGGCGGAGACGGTGGTAGTGGTGGTGGGAAATCGGTGTCGCCGTCGATGTCATCGCAACCGATGATAAAGAAAAGCCGGCGAGGGCCAAGGTCGAGGAGCTCACAGTATAGAGGAGTTACTTTTTACAGAAGAACTGGTCGATGGGAGTCTCACATATGGGATTGTGGCAAACAAGTCTATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCGGCCATTAAGTTCCGAGGAGTGGAAGCGGACATAAACTTCAACATAGAAGACTATGAAGAAGAGTTGAAACAGATGGGGAATCTGACGAAGGAAGAGTTTGTGCACGTACTTCGCCGACAAAGCACTGGGTTTCCGAGAGGAAGCTCCAAATATAGAGGTGTTACTTTACACAAGTGTGGAAGATGGGAGGCTCGTATGGGCCAATTCCTAGGCAAAAAGTATGTTTATCTGGGTTTATTTGACACCGAGGTTGAAGCTGCTAGGGCTTATGACAAAGCCGCAATTAAGTGCAACGGTAAAGACGCCGTCACCAATTTTGATCCTAGCATCTATGAAAATGAGCTTCATTCTGAGTCCTCAGGTAACGCTGTTCATCATCATCACAATCTGGATTTAAGTCTGGGCAATACGAGCTCAAATCATAGTGGTAGACAATCCTTGGTAAATCTGTTACCATCAGATCAAATGCCAAGTAGAAGTAACAACATGGAATCGCATAGAAGAAATGGGCAGGGCGAGAGTGAAACGTTGCGTTTTGTGAGTCAAACTCACCTTCAACCTCCTTCCTCAGATGAAACCCACAGATATGGTCCTTACAGAACATCTACACAACCTCAAATTCTCCACCATTTCCCCAATTTTCACCACCCAAATTATCGTATTCATAGCAGCAGTAATGGGAACGGAGGTCGTTTGGGAAGTGATCTTTCATTGTCAGTGAATGATGAAGATAGATGGCAATCTGGACGTTCTCATCAATATTTCTCCACTGCTGCAGCATCATCAGGATTCCCACAGCAGATTACTACCTCCTCACAAGCTTGGCTGCACAAAAATGGGTTCCACACTTCTCTCATGAGACCCTCCTGA 1473 0.4752 MWDLNGSPDHINDDESEGCSSLNDDKGKRVDGSVSNSSSSADDDGDGSRGKDTNKKRSSKIFGFSFTHENFSSMDSAEAEAEVLPVTRQFMPVDDDGAGPTARSSFHGPHWTGLKSSQSEVNGVGGDGGSGGGKSVSPSMSSQPMIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEELKQMGNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPSIYENELHSESSGNAVHHHHNLDLSLGNTSSNHSGRQSLVNLLPSDQMPSRSNNMESHRRNGQGESETLRFVSQTHLQPPSSDETHRYGPYRTSTQPQILHHFPNFHHPNYRIHSSSNGNGGRLGSDLSLSVNDEDRWQSGRSHQYFSTAAASSGFPQQITTSSQAWLHKNGFHTSLMRPS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0168 490 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 71 396 - -
Mibi10g0168 490 SUPERFAMILY DNA-binding domain 250 310 IPR016177 GO:0003677
Mibi10g0168 490 MobiDBLite consensus disorder prediction 44 58 - -
Mibi10g0168 490 MobiDBLite consensus disorder prediction 91 160 - -
Mibi10g0168 490 CDD AP2 250 310 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 FunFam AP2-like ethylene-responsive transcription factor 158 217 - -
Mibi10g0168 490 MobiDBLite consensus disorder prediction 8 31 - -
Mibi10g0168 490 MobiDBLite consensus disorder prediction 1 59 - -
Mibi10g0168 490 CDD AP2 159 216 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 Gene3D AP2/ERF domain 158 217 IPR036955 GO:0003700|GO:0006355
Mibi10g0168 490 Gene3D AP2/ERF domain 250 309 IPR036955 GO:0003700|GO:0006355
Mibi10g0168 490 FunFam AP2-like ethylene-responsive transcription factor 250 310 - -
Mibi10g0168 490 MobiDBLite consensus disorder prediction 352 366 - -
Mibi10g0168 490 SUPERFAMILY DNA-binding domain 158 216 IPR016177 GO:0003677
Mibi10g0168 490 Pfam AP2 domain 159 207 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 Pfam AP2 domain 250 299 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 ProSiteProfiles AP2/ERF domain profile. 251 308 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 ProSiteProfiles AP2/ERF domain profile. 159 215 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 MobiDBLite consensus disorder prediction 110 124 - -
Mibi10g0168 490 MobiDBLite consensus disorder prediction 134 148 - -
Mibi10g0168 490 SMART rav1_2 159 221 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 SMART rav1_2 251 314 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 PRINTS Ethylene responsive element binding protein signature 252 263 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 PRINTS Ethylene responsive element binding protein signature 290 310 IPR001471 GO:0003700|GO:0006355
Mibi10g0168 490 MobiDBLite consensus disorder prediction 352 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0168 Mibi-ChrMibi10 2904110 2907156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0168 1 490 AP2-EREBP Transcription Factor Family AT4G36920 52.684 1.33e-122 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi10g0168 AP2 8.2e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1819 12 34421604 34424202 Mibi10g0168 10 2904110 2907156 CCT
Mibi10g0168 10 2904110 2907156 Mibi10g0168 10 2904110 2907156 ECH