Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0161 ATGAGTTACTCGAATTGTAATGCTAACAGCCAAAACAAGGCCAATCATCAGTCCACTGGAACATTGCAATTGTTTCCTGCTGCAAGTTCCCTTTCTGCAGGTGATCAAAGGTTCTCTGCTCAGGTTTTGGGGTCAAATCATGTCGGTCTGGGTATTGGTAGCAGTGCTGGTGTTGCTCCTCAAAATGTTGACGCAGGTGCAGAATATGCTGCGAACAACTGTTACAACAATTTGAATGTATCGTTGACTTTAGGCCTTCATTCATATGGACCTGGAAATCAGAATAACAGCAACTCTCGCACAACGGTAACTGGTCATGGAAGATCAAGTTCTGCAGGGCAAGAGCAAGGTTTGGATAGCAGCCCAGTGTTTATGAGGCATTTATCCTGCAAGAGAAAGTCTTCTGAGCATACTACCAGAGAATTGTTAGTAGGTGAGAGTTCTAGCACAGCCGCACAGACTGGAATTTCCAAACGGCGGGCCTCTGAAGTCTATGGCAGCAATGGAATCAACATATCTACTTCTCGTACTAGTCCTGTTGTTCATCAACAACAGTCTGAGACCATTATTGGTCATGGCAATATAAGGTCTGATGTACAGCACTTGAATGGAGCCATACTATATGAAAACTTTGGAAGTAACACTCATCATCATATAGCTGCAAATCAACAAGATCTTCTACCAACCAGCAATTTCTCATCAGGTTACATGAGGAATACTCATATCCAGTTACCCGGTCAGTCTCCTTTGTATGGTCAAGACAACCATCCCCCTTTCTTCAGGTCTGCAGAAAGTTTTATTAGTCCAATTTCCTCAGTTCAGCCTGATGAGCATGCTCCTAATTTTCATGAAACTTCACAGGCTCCCGCCTGGATTGACATGATGAGATCAAGTAGTGGTTATTCTTCATTTTTGCCTTTCTATACTGCAGTGGAAAGTGCGGCTGTGGCACCCTTTTATGACTCAAGAAACATAAATGAAAATGGCATGCTTAACCACCTAGTTGGAAGGAGTAATTGGGCACATGATGCAAGAAACTCGCACTTTATGAGTGGAGCTGCAAGCTTCTCTGGAGGTTTTATTTGTCCCTTTCATGGTTTTGATCATAGTATAATTCCACCAGCAAATGCCCCTGCTTGGTTCCCAGGGTTCAGTTTTGCTGATCGTTATACACTGACATTGGCAAGAATTGCAAATGGTCATGTGCTTGCAACTACTGGTTTACCTCAGCATGGTCACAACCCGTCAGAATCTGACCATTCAGCAGCCTTACGTGAAATGGGTTTTCCTTTTAGATCTGGTAATGCTGCATCTCCTAATCAGCATACGTCAAGAGCAGGATCTGAGGCTCAAGCTGCTGCTAATTTAACATGGTTACTTGCTCATTCTCAACATGGTTTGGGTCTGTGGCCTGAGCTCCACTATCGCCTGGAACTGCTGCACAGTGCTGAGCCGTGGCGGCCTATGGATCAAGCTGATCCTGATGGCGGACCGGAGTCTGGGCTGAGTGAGGAAATGATTCTCAGCCACCTTAATCTGGAAAAATTCCAGGCCATCCCAGATGGGTCTGAGGAAAATGAATGCTGCTGCATCTGTCAGGATGATTACGAAGAAAATGAAGATCTGGGTAAGTTTTGGTGTGGCCACAGGTTTCATGTAGACTGTATCAAGTCATGGTTGGTTCTGAAGAACATCTGCCCGATGTGCAAACAAATTGCAATTCCTGCATTTGATGATTCTCCTTAA 1746 0.4444 MSYSNCNANSQNKANHQSTGTLQLFPAASSLSAGDQRFSAQVLGSNHVGLGIGSSAGVAPQNVDAGAEYAANNCYNNLNVSLTLGLHSYGPGNQNNSNSRTTVTGHGRSSSAGQEQGLDSSPVFMRHLSCKRKSSEHTTRELLVGESSSTAAQTGISKRRASEVYGSNGINISTSRTSPVVHQQQSETIIGHGNIRSDVQHLNGAILYENFGSNTHHHIAANQQDLLPTSNFSSGYMRNTHIQLPGQSPLYGQDNHPPFFRSAESFISPISSVQPDEHAPNFHETSQAPAWIDMMRSSSGYSSFLPFYTAVESAAVAPFYDSRNINENGMLNHLVGRSNWAHDARNSHFMSGAASFSGGFICPFHGFDHSIIPPANAPAWFPGFSFADRYTLTLARIANGHVLATTGLPQHGHNPSESDHSAALREMGFPFRSGNAASPNQHTSRAGSEAQAAANLTWLLAHSQHGLGLWPELHYRLELLHSAEPWRPMDQADPDGGPESGLSEEMILSHLNLEKFQAIPDGSEENECCCICQDDYEENEDLGKFWCGHRFHVDCIKSWLVLKNICPMCKQIAIPAFDDSP 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0161 581 MobiDBLite consensus disorder prediction 91 121 - -
Mibi10g0161 581 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 95 574 IPR045191 GO:0061630
Mibi10g0161 581 MobiDBLite consensus disorder prediction 141 160 - -
Mibi10g0161 581 SUPERFAMILY RING/U-box 523 576 - -
Mibi10g0161 581 MobiDBLite consensus disorder prediction 139 160 - -
Mibi10g0161 581 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 497 574 IPR013083 -
Mibi10g0161 581 SMART ring_2 529 569 IPR001841 -
Mibi10g0161 581 MobiDBLite consensus disorder prediction 91 118 - -
Mibi10g0161 581 Pfam RING-H2 zinc finger domain 526 570 IPR024766 GO:0008270
Mibi10g0161 581 ProSiteProfiles Zinc finger RING-type profile. 529 570 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0161 Mibi-ChrMibi10 2747606 2750982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0161 496 574 C3H Transcription Factor Family AT2G15530 45.783 1.64e-18 87.4