Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0160 ATGGGGGATATGTACGGCTATGGAAAGAGTAACATCATTCCTTCTTCTTCTTCTTCTTCACTCCAACCACCAGACGAATTTTCCCTTTTTCTGCATCAGATTCTCCTCCCTCCTTCCTCCGCCGCCGTGCCGCCGCCGTGTTCCCTCGCCCACATGACTGAGAATGCTCCTAACACTTCTGAACTTGAAAATGCAAGCCTTTCATACCCATCTTCTCTGCTTCAAGATGTAATCTCAGGTTTTGATTCTGCCTCTAAAAATCATGACTTTCTCTCTTCTTATAATATCAAGGGAGTTTCTGCTGCAAATTTGTCTTCTTCCTCGGTTGGAGTAAGTGGGAATGAGACTGATGAGTGTGATTGTGAAAGTGAGGAAGGTACAGTTGATGCAATGGTTGCCAAGTCAGTTCCTCTAAGGCGTTCATCAAAGAGAAGCAGAGCTGCAGAAGTTCATAACTTGTCTGAGAAGCGAAGGAGGAGTAGGATCAACGAAAAGCTGAAGGCTTTGCAGAATCTAATTCCAAATTCAAATAAGACTGATAAAGCTTCAATGCTTGATGAAGCTATTGAGTATCTTAAACAGCTTCAGCTTCAAGTCCAGATGCTGTCCTTGAGAAATGGCTTGAATATGCTTCCAGTGGGCTTTGCCGAAGGCTTGCAGCCTCTGTACTTGTCTCAGATGAGAGTTGAATATGGCGGCGGAGAAGAAGAAGAAGAAGATGGGTCATGTCCTCTAAACTTAACTGCTATTAACAAACGCACTGTGCCCTCTCCATCAAATATAATCAACTCAGAAACACCTTTTGGACTGGATTCCCAAGTCATAGGCCATCTTAAACCCTTTGAACTCACAAGATCATCTTCTGAGATATGCAGGGAGGACATATTGCAGCACCAGCAATTAAATGCACAAGATTCAAATACCAATCCCTTGGGTGATTCTCTAGAATTTGGGTCAGGCACGCTGGCTACAGCAGTATCTCTCTCATTTGATAAGCAAAACAACCAAATTGAAGGAGAATTGAAAGCATGCACTGCAAGAGATTAG 1047 0.4336 MGDMYGYGKSNIIPSSSSSSLQPPDEFSLFLHQILLPPSSAAVPPPCSLAHMTENAPNTSELENASLSYPSSLLQDVISGFDSASKNHDFLSSYNIKGVSAANLSSSSVGVSGNETDECDCESEEGTVDAMVAKSVPLRRSSKRSRAAEVHNLSEKRRRSRINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNGLNMLPVGFAEGLQPLYLSQMRVEYGGGEEEEEDGSCPLNLTAINKRTVPSPSNIINSETPFGLDSQVIGHLKPFELTRSSSEICREDILQHQQLNAQDSNTNPLGDSLEFGSGTLATAVSLSFDKQNNQIEGELKACTARD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0160 348 Coils Coil 185 205 - -
Mibi10g0160 348 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 20 289 IPR031066 -
Mibi10g0160 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
Mibi10g0160 348 FunFam Basic helix-loop-helix transcription factor 141 204 - -
Mibi10g0160 348 SMART finulus 152 201 IPR011598 GO:0046983
Mibi10g0160 348 Gene3D - 141 204 IPR036638 GO:0046983
Mibi10g0160 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 205 IPR036638 GO:0046983
Mibi10g0160 348 Pfam Helix-loop-helix DNA-binding domain 150 196 IPR011598 GO:0046983
Mibi10g0160 348 CDD bHLH_AtPIF_like 146 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0160 Mibi-ChrMibi10 2743190 2745891 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0160 114 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 50.237 1.58e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi10g0160 HLH 1.9e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0160 10 2743190 2745891 Mibi10g0160 10 2743190 2745891 ECH