Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0157 ATGTCTTGGGTACGAGGTAATCTCATCGGAAGAGGAAGCTTCTCCACCGTTCATCTAGCAACACCCACCATTAACAGTGTCTCTGACATTTCTCCTCCTACCGCCGTCAAATCTTCTGATATTTTCAATTGTTCTTTTCTCAAGAACGAGAAAGAAGTTCTAGATTGTCTTGGGTTATGCCCACAAATTATACAATCTTCTGGGGATGATTTCAGCTTCGAGAATGGTGTAAAGTATTACAATCTGTTTCTCGAATACGCTGGCGGCGGCAATCTCTCCGACCACATCAAAAAACAGGGTGGTAGGCTGTCGGAAAACGATGTAAAGCGATACACCATGTCAATTTTGAAGGGAATTCATCACATACATTCGAAAGGTTTTGTCCACTGTGACATCAAGCTTCAGAACATTCTTCTATTTGACAATGGAGATGTAAAAATCGCAGATTTCGGCCTAGCTAAGAAAACAGGGGAAGCAGAAAAACAGAGGAAGGGAGAGAAAAAGTGTGAATGGAGAGGAACCCCTCTGTTTATGTCGCCGGAATCTGTGAGAGAAAATGTGTATGAATCTCCAGCAGATATTTGGTCTCTTGGCTGTGTAGTGGTGGAGATGGTGACCGGAAAACCCGCCTGGAAAAGCCGGGAAGGATCGGAATTTAGCGATGTTTGTTCGCTTTTGCTTCGAATTGGGGTCGGAGAGGAGTTGCCGGAGATTCCAGACGAGTTATCGGAGGAAGGGAGGGATTTTTTAAGGAAGTGTTTGGTGAAAGATCCGGCGAAGAGATGGACGGCGGAGATGCTTTTGGAGCATCCCTTTTTGAATCTGGACGGCTGCGAAGAAGAATCGTCGCCGAGGTGTCATTTCGATTTTTCGGACTGGATTTCGGGCTCGCCGGAATCCGGCGAGTGGAGTGTGTGGGAATTCGAAACCACGTCGTCGAATGTTGGCGGTTTCTGTTCGCCGGTGGATCGGCTCCGGCAAATGTTGACGGAAGAGAGGCCCAATTGGTCGGAATCGGAAAGTTGGGTGGCTGTTAGGTGGGAATGA 1047 0.4718 MSWVRGNLIGRGSFSTVHLATPTINSVSDISPPTAVKSSDIFNCSFLKNEKEVLDCLGLCPQIIQSSGDDFSFENGVKYYNLFLEYAGGGNLSDHIKKQGGRLSENDVKRYTMSILKGIHHIHSKGFVHCDIKLQNILLFDNGDVKIADFGLAKKTGEAEKQRKGEKKCEWRGTPLFMSPESVRENVYESPADIWSLGCVVVEMVTGKPAWKSREGSEFSDVCSLLLRIGVGEELPEIPDELSEEGRDFLRKCLVKDPAKRWTAEMLLEHPFLNLDGCEEESSPRCHFDFSDWISGSPESGEWSVWEFETTSSNVGGFCSPVDRLRQMLTEERPNWSESESWVAVRWE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0157 348 CDD STKc_MAPKKK 2 273 - -
Mibi10g0157 348 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 314 - -
Mibi10g0157 348 ProSitePatterns Protein kinases ATP-binding region signature. 9 37 IPR017441 GO:0005524
Mibi10g0157 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Mibi10g0157 348 SUPERFAMILY Protein kinase-like (PK-like) 3 277 IPR011009 -
Mibi10g0157 348 ProSiteProfiles Protein kinase domain profile. 3 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0157 348 SMART serkin_6 3 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0157 348 Gene3D Transferase(Phosphotransferase) domain 1 2 293 - -
Mibi10g0157 348 Pfam Protein kinase domain 5 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0157 Mibi-ChrMibi10 2716277 2717323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0157 1 346 MAP Kinase Kinase Kinase AT3G50310 50.413 9.03e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi10g0157 Pkinase 7.6e-56 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1839 12 34743143 34744222 Mibi10g0157 10 2716277 2717323 CCT
Mibi10g0157 10 2716277 2717323 Mibi10g0157 10 2716277 2717323 ECH