Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0150 ATGACTCAGCAGAGATCCTCGCCGGCTCCGTTTCTGACGAAGACGTATCAATTGGTTGAAGATGAAGATACAAACGACGTGATTTCGTGGAGTGAAAGTGGCGAGACTTTCGTGGTTTGGAAGCAAGCCGATTTCGCCAAAGATTTGCTTCCTAATTATTTCAAACATAACAATTTCTCCAGCTTTGTTCGTCAGCTTAACACCTATGGATTCCGGAAGATAGTACCGGACAAATGGGAATTCTCCAACGACCATTTCAAGCGAGGACGCAAGGAGCTCCTCTCGGAGATCAAACGCCGGAAAACTCACGCGCCACCGTCCGGGAAGTCCGGCAGCGGCGGAGGCGGAAATTCCGCGTCGAACTCCGGCGCCGGCGACGACGTGGGGTCCACCTCCACTTCCTCAACAGATTCCAAGAACAAGCCGCCACCTCCGCCGCAGACGGCGACGGCGCCGGCGCCGGAATACGCAGAGTTGACGGGAGAGAATGAGAAACTGAGGAAAGATAATGAAATGCTGAGCTCAGAGCTTGCGGAAGCGAAGAAACAATGTGAGGAATTGGTGGGGTTTTTGAGGGAGTATCTGAAAGTGGGGCCCGATCAGATAAATAGGATAATGATGCGGCAAGGAACAAGTGGGTCCAGCCGCGAGGAAGAAGAAGGAGAAGGAGAAGGAGATGAAACATCGAAGGTGGAGGTGGTAGGTGGAGGAGGAGAAAGTCTGAAACTATTTGGGGTTTGGTTGAGAGGTGAGAAAAAAACGACCACCAAGGAGGAAATGAGGGCCCACAAGAGAGGCCGAGAAGAAGAAGAAGATGACGACGACCAAATTGCCTTTGGTGGGACCCACCCTTCCAAGGAGCTCAAGGCTACTGTGCATTTTGGTGCTTCTCCTGTGAAAGTCATGACCAATTGA 915 0.5169 MTQQRSSPAPFLTKTYQLVEDEDTNDVISWSESGETFVVWKQADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFSNDHFKRGRKELLSEIKRRKTHAPPSGKSGSGGGGNSASNSGAGDDVGSTSTSSTDSKNKPPPPPQTATAPAPEYAELTGENEKLRKDNEMLSSELAEAKKQCEELVGFLREYLKVGPDQINRIMMRQGTSGSSREEEEGEGEGDETSKVEVVGGGGESLKLFGVWLRGEKKTTTKEEMRAHKRGREEEEDDDDQIAFGGTHPSKELKATVHFGASPVKVMTN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0150 304 ProSitePatterns HSF-type DNA-binding domain signature. 50 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g0150 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 219 IPR027725 -
Mibi10g0150 304 SMART hsfneu3 7 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g0150 304 MobiDBLite consensus disorder prediction 254 271 - -
Mibi10g0150 304 FunFam Heat stress transcription factor B-4 3 101 - -
Mibi10g0150 304 Gene3D - 3 101 IPR036388 -
Mibi10g0150 304 SUPERFAMILY "Winged helix" DNA-binding domain 6 100 IPR036390 -
Mibi10g0150 304 Gene3D - 150 195 - -
Mibi10g0150 304 MobiDBLite consensus disorder prediction 254 284 - -
Mibi10g0150 304 Pfam HSF-type DNA-binding 11 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g0150 304 MobiDBLite consensus disorder prediction 96 155 - -
Mibi10g0150 304 Coils Coil 156 183 - -
Mibi10g0150 304 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g0150 304 PRINTS Heat shock factor (HSF) domain signature 11 34 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g0150 304 PRINTS Heat shock factor (HSF) domain signature 49 61 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g0150 304 MobiDBLite consensus disorder prediction 205 235 - -
Mibi10g0150 304 MobiDBLite consensus disorder prediction 111 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0150 Mibi-ChrMibi10 2599629 2602118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0150 4 259 HSF AT4G36990 53.906 1.49e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi10g0150 HSF_DNA-bind 5.1e-33 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1849 12 34864325 34866006 Mibi10g0150 10 2599629 2602118 CCT
Mibi10g0150 10 2599629 2602118 Mibi10g0150 10 2599629 2602118 ECH