Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0134 ATGGGTCTCTGTACTTCAAAGCCATCAGCCAATCTTACACCTTCGTCTCCAAAATCCGAAACCGAATCGCCAAGGAATAACCAGGTACCTTCACATAGCAACAACTCTGTAACTGTTAATGTCTATCCTCAACCTCATTCCACTAATTTAAACGGAGAAAACCCTAGCAAGGAGAGGAAGGAAGTGGAAAATGTTAAGAAATCGCCGTTCTTCCCGTTTTATAGCCCTAGTCCGGCTCACTATTTGTTCTCGAAGAAATCTCCGGCGAGATCTCCGGCGAATGGGAGCTCAAATTCAACGCCGAGGAGGTTTTTCAAAAGGCCGTTTCCTCCGCCGTCGCCGGCGAAGCATATAAAGGCTGTGTTGGCGAGGAGGCATGGATCGGTGAAGCCGAATGAGGTGACGATACCAGAAGGGAGTGAAGCAGAGGTGGTTGCTAATGCTGGGCTTGATAAGAGTTTTGGATTCTCAAAGCATTTTGGGAGTAAGTTTGAGTTAGGAGATGAGGTTGGGAGAGGTCACTTTGGGTACACTTGTGCTGCTAAATTTAAGAAGGGTGAGCTCAAGGGGCAACAGGTTGCTGTGAAAGTTATTCCCAAAGCAAAGATGACCACTGCCATTGCTATTGAGGATGTGAGAAGAGAAGTAAAAATATTGAGAGCTTTAACAGGACATAAGAATCTTGTACAATTCTATGATGCCTATGAAGACCAGGATAATGTCTATATAGTAATGGAGTTGTGTGAAGGAGGGGAGCTGTTGGACAGAATACTATCAAGAGGTGGAAAATACTCAGAGGATGATGCAAAAGCTGTAATGATACAAATACTTAATGTTGTTGCATTCTGCCATTTACAGGGTGTTGTTCACCGTGATCTTAAACCTGAGAATTTCTTGTTTACGTCGAAGGATGAAAACTCAGAGCTGAAGGCTATAGACTTTGGGTTGTCAGATTTTGTAAAGCCAGATGAAAGGCTTAATGATATTGTTGGCAGTGCATACTATGTGGCTCCTGAAGTGTTGCATAGATCTTACACCACAGAGGCTGATGTCTGGAGTATTGGTGTGATTGCATATATTCTTTTGTGTGGAAGCCGTCCATTTTGGGCCCGGACTGAGTCTGGAATCTTTCGAGCTGTATTGAAAGCTGATCCAACTTTTGATGAACCTCCTTGGCCTTCTTTATCATCTGAGGCGAGAGACTTTGTTAAACGGCTACTAATTAAAGATCCACGGAAAAGAATGACGGCTGCACAGGCATTGAGTCATCCCTGGATTAGAAATTATAAGGATGTAAAAGTACCTGTGGATATTCTAATATTCAAGCTCATGAAGGCATACATGCGTTCCTCATCTCTACGAAAAGCAGCTTTAAGGGCACTGTCTAAGACGCTAACAGCAGATGAACTATTTTATTTGAAGGAGCAATTTACACTTTTAGAGCCCAACAAAAATGGTACTATAAGCTTGGAAAATATTAAAGCGGTCTTGATGAAAAATGCTACAGATGCCATGAAAGAGTCACGCATTCCTGACTTTCTGGCATCACTCAATGCATTGCAATATAGAAGGATGGATTTTGATGAGTTCTGTGCAGCTGCACTCAGTGTTCATCAACTTGAAGCACTTGATCGGTGGGAGCAGCATGCTCGCTGTGCCTATGAACTTTTTGAAAAAGATGGAAATCGCGCTATTGTCATTGAGGAACTAGCTTCGGAACTTGGCCTTGGCCCATCTGTCCCTGTTCATGCTGTTCTTCATGATTGGATTAGACACACTGATGGAAAGTTAAGCTTCCTTGGTTTTGTCAAATTGTTGCATGGACCATCTCGAAGTCTTGCTAAGGCTCAATAG 1854 0.4304 MGLCTSKPSANLTPSSPKSETESPRNNQVPSHSNNSVTVNVYPQPHSTNLNGENPSKERKEVENVKKSPFFPFYSPSPAHYLFSKKSPARSPANGSSNSTPRRFFKRPFPPPSPAKHIKAVLARRHGSVKPNEVTIPEGSEAEVVANAGLDKSFGFSKHFGSKFELGDEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDQDNVYIVMELCEGGELLDRILSRGGKYSEDDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPTFDEPPWPSLSSEARDFVKRLLIKDPRKRMTAAQALSHPWIRNYKDVKVPVDILIFKLMKAYMRSSSLRKAALRALSKTLTADELFYLKEQFTLLEPNKNGTISLENIKAVLMKNATDAMKESRIPDFLASLNALQYRRMDFDEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0134 617 FunFam CDPK-related kinase 1 157 252 - -
Mibi10g0134 617 PANTHER SERINE/THREONINE-PROTEIN KINASE 148 592 - -
Mibi10g0134 617 MobiDBLite consensus disorder prediction 85 111 - -
Mibi10g0134 617 Gene3D - 466 535 - -
Mibi10g0134 617 MobiDBLite consensus disorder prediction 1 63 - -
Mibi10g0134 617 ProSiteProfiles Protein kinase domain profile. 164 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0134 617 SUPERFAMILY EF-hand 454 608 IPR011992 -
Mibi10g0134 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Mibi10g0134 617 Gene3D Transferase(Phosphotransferase) domain 1 253 438 - -
Mibi10g0134 617 MobiDBLite consensus disorder prediction 89 103 - -
Mibi10g0134 617 Gene3D - 444 605 - -
Mibi10g0134 617 FunFam Calcium-dependent protein kinase SK5 336 431 - -
Mibi10g0134 617 FunFam CDPK-related kinase 1 462 535 - -
Mibi10g0134 617 SUPERFAMILY Protein kinase-like (PK-like) 161 453 IPR011009 -
Mibi10g0134 617 Gene3D Phosphorylase Kinase; domain 1 157 252 - -
Mibi10g0134 617 SMART serkin_6 164 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0134 617 MobiDBLite consensus disorder prediction 1 52 - -
Mibi10g0134 617 CDD STKc_CAMK 163 425 - -
Mibi10g0134 617 Pfam Protein kinase domain 165 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0134 617 ProSitePatterns Protein kinases ATP-binding region signature. 170 196 IPR017441 GO:0005524
Mibi10g0134 617 FunFam CDPK-related kinase 3 156 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0134 Mibi-ChrMibi10 2051645 2056454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0134 1 617 EF-hand Containing Proteins AT3G50530 76.080 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi10g0134 Pkinase 1.8e-71 CL0016