Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0127 ATGGCGAACCCAAGATGCTTTCTTGACATTAGCATTGGAGGAGAGTTAGAGGGTAGGATTGTCATCGAGCTTTACAAAGACGTCGTCCCCAAAACCGCCGAGAATTTCAGAGCTCTTTGTACTGGTGAAAAGGGCCTCGGTCCCAACACCGGTGTTCCCCTCCATTTCAAGGGAGTTCGTTTTCATCGCATCATTAAAGGTTTCATGGTGCAAGGTGGGGATATCTCAGCTGGCGATGGCACTGGAGGGGAGTCCATTTATGGTTTGAAATTTGAGGATGAGAATTTTGAGTTGAAGCATGAGAGGAAAGGGATACTGTCAATGGCTAATGCGGGTCCCAACACCAATGGATCTCAGTTTTTCATTACTACTACTAGGACTCCTCATTTAGATGGAAAGCATGTAGTGTTTGGAAAGGTGATAAAAGGAATGGGTGTGGTGCGTTCTATTGAACATGTTACTACTGGGGAAAGTGACTGTCCCGCGCACGATGTCATTGTTGCTGATTGTGGAGAAATAGCTGAAGGGGATGATGATGGAACCATAAACTTCTTTAAAGATGGGGATACTTATCCTGATTGGCCGGCTGACCTAAGCGTGAAGCCGGAAGAAATTTCTTGGTGGATGGAGGCTGTTGATTCTATCAAAAGTCTAGGAAATGAACAGTATAAGAAGCAAGATTTTAGATCTGCTCTTCGGAAGTATCGAAAAGCTTTGCGCTATTTGGATGTCTGCTGGGAAAAGGATGACATTGATGAAGGTCAATTCGATAAAAAGAGCTCTGCTTTAAGGAAGACGAAATCTCAAATCTTTACCAACAGTTCTGCTTGTAACTTGAAATTAGGTGATGCAAAGGGAGCATTGACGGATTCAGATTTTGCATTACATGATGAAGATAATGTAAAGGCCCTGTTCCGCAAAGGCCAGGCATGCATGGCACTCAATGATCTGGATGCTGCTGTTGAAAGCTTCAGAAAAGCATTAGAGTTGGAGCCAAATGATGGAGGAATTAAGAAAGAGCTTACAGCTGCAAGGAAAAAGGTTGCTGATAGACGTGATCAAGAGAAGAAAACCTATTCCAGAATGTTCAAATAG 1095 0.4338 MANPRCFLDISIGGELEGRIVIELYKDVVPKTAENFRALCTGEKGLGPNTGVPLHFKGVRFHRIIKGFMVQGGDISAGDGTGGESIYGLKFEDENFELKHERKGILSMANAGPNTNGSQFFITTTRTPHLDGKHVVFGKVIKGMGVVRSIEHVTTGESDCPAHDVIVADCGEIAEGDDDGTINFFKDGDTYPDWPADLSVKPEEISWWMEAVDSIKSLGNEQYKKQDFRSALRKYRKALRYLDVCWEKDDIDEGQFDKKSSALRKTKSQIFTNSSACNLKLGDAKGALTDSDFALHDEDNVKALFRKGQACMALNDLDAAVESFRKALELEPNDGGIKKELTAARKKVADRRDQEKKTYSRMFK 364
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0127 364 Pfam Tetratricopeptide repeat 301 334 IPR001440 GO:0005515
Mibi10g0127 364 SUPERFAMILY TPR-like 209 360 IPR011990 GO:0005515
Mibi10g0127 364 SUPERFAMILY Cyclophilin-like 2 173 IPR029000 -
Mibi10g0127 364 CDD cyclophilin_ABH_like 4 171 - -
Mibi10g0127 364 FunFam peptidyl-prolyl cis-trans isomerase D 210 364 - -
Mibi10g0127 364 ProSiteProfiles TPR repeat region circular profile. 301 334 - -
Mibi10g0127 364 FunFam Peptidyl-prolyl cis-trans isomerase D 1 178 - -
Mibi10g0127 364 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 173 - -
Mibi10g0127 364 SMART tpr_5 212 245 IPR019734 GO:0005515
Mibi10g0127 364 SMART tpr_5 301 334 IPR019734 GO:0005515
Mibi10g0127 364 ProSiteProfiles TPR repeat profile. 301 334 IPR019734 GO:0005515
Mibi10g0127 364 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 172 IPR002130 GO:0000413|GO:0003755
Mibi10g0127 364 Gene3D Tetratricopeptide repeat domain 208 364 IPR011990 GO:0005515
Mibi10g0127 364 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 IPR020892 GO:0003755|GO:0006457
Mibi10g0127 364 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 171 IPR002130 GO:0000413|GO:0003755
Mibi10g0127 364 Gene3D - 1 179 IPR029000 -
Mibi10g0127 364 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Mibi10g0127 364 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Mibi10g0127 364 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Mibi10g0127 364 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Mibi10g0127 364 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi10g0127 Mibi-ChrMibi10 1968097 1971384 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0127 17 170 U-box Gene Family AT5G67530 43.871 2.94e-34 131