Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0122 ATGTCGGAATCAAAAACACCATGTGCTGCGTGCAAGTTGCAGAGACGAAGATGCACAAAAGAATGTGTATTTGCGCCATATTTCTCACCAGATAGCACTGAAAAGTTTGAGAAGGTGCACCAAGTGTTCGGTGCCAGCAATGTCGCTAAGATCCTCACAAATCTAGGCGTGTCTCAACGCGCAGAAGCCGTCAGGTCATTGGTTTTTGAAGCCGAAGCTCGTTGTTACAACCCAGCGTATGGCTGTGTGGGCTCCATCTTTATTCTCCAACAACAAATGAAGCAGATAGCACATGAAATCGAGCAAACCAAGAAGGAGCTCGCTATTTATGAAGGCCCCACTGCCCTCCAATCCAATATGCTTCCCACATTACATTCTCATCATAGAGGAAGGGCCCCACTACAACAACAGGGCAACAACAATAATTATTGTCCCATTATTCGTGAGCCTCAACAGCAGCATCAGAGGTTGTTTCGGGCATATGATCAGCAACAACCTTCATATGACAACTTTCTTTACCATGGGACACAAGGAGCACAAGAACAAGACCAAGGAATGGGAGATGATCATAATATGCAAAGGCAGCATCATCAGAATCAGCACTTATTTGTACAACCACAACAATTGAAAATGCCGGAGCAGGATCAGCAGCATCAACAACAACAACCTCTGCAGCAACAACATCAACAGCAAGAGATACCAGAAGATCCTAATGATAGGAGCGCTGCTTCTTGTTGA 738 0.4512 MSESKTPCAACKLQRRRCTKECVFAPYFSPDSTEKFEKVHQVFGASNVAKILTNLGVSQRAEAVRSLVFEAEARCYNPAYGCVGSIFILQQQMKQIAHEIEQTKKELAIYEGPTALQSNMLPTLHSHHRGRAPLQQQGNNNNYCPIIREPQQQHQRLFRAYDQQQPSYDNFLYHGTQGAQEQDQGMGDDHNMQRQHHQNQHLFVQPQQLKMPEQDQQHQQQQPLQQQHQQQEIPEDPNDRSAASC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0122 245 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mibi10g0122 245 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Mibi10g0122 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 227 - -
Mibi10g0122 245 Coils Coil 86 106 - -
Mibi10g0122 245 MobiDBLite consensus disorder prediction 197 232 - -
Mibi10g0122 245 MobiDBLite consensus disorder prediction 179 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0122 Mibi-ChrMibi10 1901210 1901947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0122 1 133 AS2 family AT5G66870 57.895 5.17e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi10g0122 LOB 1.9e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0122 10 1901210 1901947 Mibi12g1869 12 35058536 35059492 CCT
Mibi10g0122 10 1901210 1901947 Mibi10g0122 10 1901210 1901947 ECH