Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0101 ATGACCCGAGGCTCGAAGGTTTCAGAAGGTGACGGTAATGCTATTCACTCAAAAACCAGAACAAACCAATTCAATTTCTATCAAGAGATGTCATATTACTGGAAGAACTTCGTTATTGTGCTCACGATCTTCTTCTTCTTCTACTCAACAAGTGCGGAAAAGTCCAGCGACTTTAATCGCAGTTGTGGAAGCCATTCTGTGCCGTATCCTTTCGGATTCTCTGGGAAGAGTCCGATCAAATTGAATTGCAGCGATGGAATCATGAAAATTGGGGGATTTCAGGTGGAGAAAGTAACCTCTAGAAGTATATTCGTCAATCTTCCTGCAAAATGTAACCGAAGCATGAAATCTATCCAACCTCTTTTCAGTGAAAACTTCGCTCCCACACGCAACAATAGCCTTCTGGTTCAAAATTGTTCGTCTGATCAGCATAGCAACTGCTTTCTACCGACCACAAGCCTTATCAATGATCTAATCAAGTCTCCGAATTGCCGTAATCGTAACATCAGTTGCTTTTTGCAAACGAAGGATGATACAGATGTTATGACAAGATCGGAAGTAAATCTAAATCAAAGTGCGTGTATATTGTTATCTGCGATTGCTATTGAGGAAGGCGAAGACTCGACGATTTCGCTCCTTCTTCAGGTGATTGAATTGGGTTGGTGGCTTAAAGATCCACCCCTATGCTCTCAAAATGCAATCCGTACGAAAGTCCGTCACGACGGCGTGAAGATTGGGTATCGATGCCAGTGTAATGAAGGTTACGTTGGAGATGGGTTCGATGACGGAGCTGGTTGCCGGAAAGTTTCTCACTGCGGAGCCGCAACACTATTGTCTGGTGGATGTGGAAAAGCAATCAAAATCGGCGCTCTTGTTGGAGGTATCATTGTTGTAGCTTTCATCCTGACTGGAGTGTGTCTTCGTTGTTACTTTGCTCGGCGCCGTTATACTGGTTTGAGAAAACAAATGACAGTAAAGCGCCTATTACGTGAAGCTGCAGGCGATTCTACTGTTCCTTTTTACCCGTACAAAGAAATAGAAAAAGCCACTAATTTTTTCTGTGAGGAACAGAAGCTGGGAACTGGGGCTTTTGGTACGGTATATTCAGGAAAACTACACGATAATGAATGTGTTGCAATTAAAAAGATCAAGTATAGAGACACCAACAGTGTTGACCGAGTTATGAACGAGATTAAACTTCTTTCTTCTGTGAGTCACCCTAATTTAGTACGCCTCTTGGGTTGCTGCATTGAAGGTGGTGAGCAAATACTTGTTTATGAGTTTATGCCCAATGGAACACTATCCCAGCATTTACAAAGAGTGACGGGAAATGGACTTCCATGGACAACACGACTCACCATTGCTGCTGAAACTGCTAATGCTATAGCATATCTTCATTCTTCCATCGATCCCCCAATTTATCACAGGGACATAAAATCCAGTAATATACTCTTAGATTACAGCTTCAAATCGAAAGTAGCAGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCACATATCTCAACTGCTCCACAAGGGACACCAGGCTATGTTGACCCTGAATACCACCAAAACTTCCACCTTTCTGATAAGAGTGACGTTTATAGTTTTGGAGTGGTTTTGGTAGAGATAATAACAGCCCTAAAAGTGGTTGATTTTGCGCGACCTCACACTGAGATTAATTTGGCTGCACTTGCTGTGGATAGGATCAGAAGAGGATCTGTGGATGAGATCATAGACCCTTTTCTGGAGCTTCACAGGGATGCCTGGACACTCTACTCTGTTCACAAGGTGGCTGAGCTTGCATTCAGATGCCTTGCTTATCATAGTGACATGAGGCCAACCATGTTGGAAGTAGCAGAGGAGCTAGAGCAAATCCGACGCAGTGGATGGGCAACAATGGAAGAAACCTTATGCACGGCGTCATCCATTGGTTCCTCATGTTCGTCACCTCGCATTGGAAGTGAGAAGTCGATGGATCGTATTGTTTCTCTTAAAAAAGCGGAACGAGGGAGCAAGAGATCAATGAGTAAAAAAAGGATGGATAAAATACAGCATCCCCTTGAAGAAGTGGAGGATAGCTCTCCTGTATCAGTGCATGACCCTTGGTTAAGTGGACAAAGCTCACCCTCAGCAAATAGCTTGTTGGGAAATATAGTTCAGTGA 2172 0.4337 MTRGSKVSEGDGNAIHSKTRTNQFNFYQEMSYYWKNFVIVLTIFFFFYSTSAEKSSDFNRSCGSHSVPYPFGFSGKSPIKLNCSDGIMKIGGFQVEKVTSRSIFVNLPAKCNRSMKSIQPLFSENFAPTRNNSLLVQNCSSDQHSNCFLPTTSLINDLIKSPNCRNRNISCFLQTKDDTDVMTRSEVNLNQSACILLSAIAIEEGEDSTISLLLQVIELGWWLKDPPLCSQNAIRTKVRHDGVKIGYRCQCNEGYVGDGFDDGAGCRKVSHCGAATLLSGGCGKAIKIGALVGGIIVVAFILTGVCLRCYFARRRYTGLRKQMTVKRLLREAAGDSTVPFYPYKEIEKATNFFCEEQKLGTGAFGTVYSGKLHDNECVAIKKIKYRDTNSVDRVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRVTGNGLPWTTRLTIAAETANAIAYLHSSIDPPIYHRDIKSSNILLDYSFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPEYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPHTEINLAALAVDRIRRGSVDEIIDPFLELHRDAWTLYSVHKVAELAFRCLAYHSDMRPTMLEVAEELEQIRRSGWATMEETLCTASSIGSSCSSPRIGSEKSMDRIVSLKKAERGSKRSMSKKRMDKIQHPLEEVEDSSPVSVHDPWLSGQSSPSANSLLGNIVQ 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0101 723 Pfam Protein tyrosine and serine/threonine kinase 356 625 IPR001245 GO:0004672|GO:0006468
Mibi10g0101 723 SUPERFAMILY Protein kinase-like (PK-like) 335 626 IPR011009 -
Mibi10g0101 723 SMART serkin_6 353 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0101 723 Gene3D Phosphorylase Kinase; domain 1 316 428 - -
Mibi10g0101 723 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 40 709 IPR044652 GO:0004672
Mibi10g0101 723 ProSiteProfiles Protein kinase domain profile. 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0101 723 Gene3D Transferase(Phosphotransferase) domain 1 429 647 - -
Mibi10g0101 723 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Mibi10g0101 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Mibi10g0101 723 MobiDBLite consensus disorder prediction 702 723 - -
Mibi10g0101 723 MobiDBLite consensus disorder prediction 667 723 - -
Mibi10g0101 723 MobiDBLite consensus disorder prediction 667 698 - -
Mibi10g0101 723 CDD STKc_IRAK 359 628 - -
Mibi10g0101 723 FunFam Wall-associated receptor kinase-like 20 429 638 - -
Mibi10g0101 723 FunFam Wall-associated receptor kinase-like 14 320 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0101 Mibi-ChrMibi10 1661906 1666938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0101 22 721 Receptor kinase-like Gene Family AT2G23450 53.287 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi10g0101 PK_Tyr_Ser-Thr 3.3e-46 CL0016