Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0090 ATGGGAATAGCGACACCGCCAGTACTCCCACAGATTCTTTCTCACACAGCCAAACCAAGTCACCATTCACTTTCATCAATAATAGAGTCCAATTCTATGTCCCAAGATTATCACCAAGGAATCTTCACCTTCTCCAATGGGTTCGAGAGATCCACCAATTTAACTCACCACCAGCATCAGTTAGCACAGCAGATCCGGAGAGACAAAGTGAGGGGGCTGGACCCCACACAACCTCCTCCTCCTCCGCCCCCGTTGGTCACCGTCGGTATCGAGGAGGAGGAACCCGCGGCGGTGTACGAAACCGGCGGCGGGATGTTATCTGAAATGTTCAATTTCCCCCCTCCCGCCGGCGCCACCACCGCCACGGAATTGTTAGAACAACAACAACAACAACCGTCCATGTACCGGGCCTCCCGGCCGCAACCGGTGGCCACGGACTGGTACAGACAAGGGATGTTAAGTGGGTTAGGAGATTCAAAGAATCAAAACAATAACAACAGAAGTGACAATACAGGTATGGTATTAGACCATCATCATCCTCATCATCATCATCATCATGCTCAGATTTCAAGCATGAATGCGGATTCAGCTGCAGCCATGCAGCTTTTTCTGATGAACCCACCACAAACAAGATCGCCTTCACCTACTCAAAGCCACACCCCAAATTCAACATCCCTCCAAGGATTAGGTGGCTTTGGCACATTCCCATGGATTCCTCATAGTTCTCACCAAGGAGGGTCGCCCGCCACCGTGGCACCACCACATATCGGAGGGGTCATGGAGGCTCAGGGCCTTTCGCTGTCCTTGTCGTCGTCCTTGGAGGCCGCGAAGGCCGAGGAATTGAGGATGGGAGATAGTGGATTTCTGTATTACAACAACAACAACAACAACAATCAAGTAAGCGGTGGTGGAGGAGGAGGAGGGTCACAGTATCCGTACAAGACATTACATTTTCAAGGAGGGTCGTCGTCAACGACGGTTGGGCCGGGTCAGGCCCATGTGGGATTCGGGTCGTCTTCATCGTTAGGGGTGGTGAATGTGCTGAGGAATTCAAAGTACGTGAAGGCAGCACAGGAATTGCTTGAGGAATTCTGTAGTGTTGGGAGGGGTCAGTTGAAGAGGAACAAGTTCACAAGGCAGAACTCATCAAACCCTAGTTCTTCCATTAATCCTCCTCTTCCTTCTGGGTCTTCATCTTCATCAAAAGATCCTCCTCCTTTGTCTTCTGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGTGGATAGGAGATACAACCATTACTGTGAGCAAATGCAAATGGTGGTGAACTCATTCGACATGGTGATGGGATTCGGGTCGGCGGTGCCGTACACTGCGTTAGCGCAGAAGGCGATGTCGCGGCATTTCCGGTGTTTGAAGGACGCGATAACGGCGCAGCTGAAGCACAGTTGTGAGCTGCTGGGTGAGAAGGATGGAGGAGGAAGCACAGGGATAACAAAAGGGGAGACACCAAGGCTGAAGCTTCTAGAACAAAGCCTGAGACAACAGAGAGCATTCCACCAAATGGGGATGATGGAACAAGAAGCATGGCGTCCCCAAAGAGGCCTCCCTGAAAGATCCGTCAACATTTTGCGTGCCTGGCTCTTCGAGCATTTTCTTCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGACTCTCCAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTGCGGCTGTGGAAACCTATGATAGAAGAAATGTACCAACAAGAACTTAAGGAAGCAGAAGGAGAAGAGAGAGAAGAAAGGAGCCAAAGCAACAACAACAGCATCGCACAAACTCCAACCACAACAACAGCAACAACTTCAACAACAGAAGCAGCAGCAGCGCCACCACAACCAACAACAACTACACTCACAACAACACAAACAACGACACTCACAACAGCAGGCAAAAGATCCCAAATCAATGCATCAGATAGTGACCCTTCACTCATTGCAATCAATACCCAACTCTTCTCGGAATCCCAACCAAACCTCTCTTCCTCCGCCGCAACCGCCGCCACATCTGAGGTGGCGCCACCCTCGTCTCAGTGTTATGACTCAGACCTGCTGCCACCTCACAGATCAGATGACACGTGTCGCCACGGCAGCCTGATTGCACAAGAATATGGTACCACCTCTGGTAATTCTGACATTATTGGTTCTTCCACTCTCATTAGGTTTGGGACCACCTCCGCCGGAGATGTTTCTCTCACCCTAGGGCTCCGCCACGCCGGCGGCGGCAACATCCCTGACAAAGCACCTCCTCCTCCTTTCTCTGTTAGAGACTTTGGAGGCATTTGA 2376 0.5072 MGIATPPVLPQILSHTAKPSHHSLSSIIESNSMSQDYHQGIFTFSNGFERSTNLTHHQHQLAQQIRRDKVRGLDPTQPPPPPPPLVTVGIEEEEPAAVYETGGGMLSEMFNFPPPAGATTATELLEQQQQQPSMYRASRPQPVATDWYRQGMLSGLGDSKNQNNNNRSDNTGMVLDHHHPHHHHHHAQISSMNADSAAAMQLFLMNPPQTRSPSPTQSHTPNSTSLQGLGGFGTFPWIPHSSHQGGSPATVAPPHIGGVMEAQGLSLSLSSSLEAAKAEELRMGDSGFLYYNNNNNNNQVSGGGGGGGSQYPYKTLHFQGGSSSTTVGPGQAHVGFGSSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQLKRNKFTRQNSSNPSSSINPPLPSGSSSSSKDPPPLSSADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDMVMGFGSAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGGGSTGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMIEEMYQQELKEAEGEEREERSQSNNNSIAQTPTTTTATTSTTEAAAAPPQPTTTTLTTTQTTTLTTAGKRSQINASDSDPSLIAINTQLFSESQPNLSSSAATAATSEVAPPSSQCYDSDLLPPHRSDDTCRHGSLIAQEYGTTSGNSDIIGSSTLIRFGTTSAGDVSLTLGLRHAGGGNIPDKAPPPPFSVRDFGGI 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0090 791 MobiDBLite consensus disorder prediction 375 414 - -
Mibi10g0090 791 MobiDBLite consensus disorder prediction 602 672 - -
Mibi10g0090 791 SMART HOX_1 532 596 IPR001356 GO:0003677
Mibi10g0090 791 MobiDBLite consensus disorder prediction 206 228 - -
Mibi10g0090 791 FunFam BEL1-like homeodomain protein 4 535 597 - -
Mibi10g0090 791 MobiDBLite consensus disorder prediction 771 791 - -
Mibi10g0090 791 MobiDBLite consensus disorder prediction 375 406 - -
Mibi10g0090 791 MobiDBLite consensus disorder prediction 155 171 - -
Mibi10g0090 791 MobiDBLite consensus disorder prediction 315 329 - -
Mibi10g0090 791 Pfam Associated with HOX 347 479 IPR006563 -
Mibi10g0090 791 SMART prehox3 342 480 IPR006563 -
Mibi10g0090 791 MobiDBLite consensus disorder prediction 300 329 - -
Mibi10g0090 791 CDD homeodomain 532 593 IPR001356 GO:0003677
Mibi10g0090 791 SUPERFAMILY Homeodomain-like 534 599 IPR009057 -
Mibi10g0090 791 Coils Coil 595 615 - -
Mibi10g0090 791 MobiDBLite consensus disorder prediction 692 707 - -
Mibi10g0090 791 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 198 616 - -
Mibi10g0090 791 ProSiteProfiles 'Homeobox' domain profile. 529 592 IPR001356 GO:0003677
Mibi10g0090 791 MobiDBLite consensus disorder prediction 692 724 - -
Mibi10g0090 791 MobiDBLite consensus disorder prediction 152 192 - -
Mibi10g0090 791 Gene3D - 535 597 - -
Mibi10g0090 791 MobiDBLite consensus disorder prediction 616 672 - -
Mibi10g0090 791 Pfam Homeobox KN domain 549 588 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0090 Mibi-ChrMibi10 1530618 1536999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0090 749 791 Homeobox Transcription Factor Family AT2G23760 67.442 1.17e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi10g0090 POX 2.6e-51 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1916 12 35418043 35423579 Mibi10g0090 10 1530618 1536999 CCT
Mibi10g0090 10 1530618 1536999 Mibi10g0090 10 1530618 1536999 ECH
Mibi10g0090 10 1530618 1536999 Mibi12g1916 12 35418043 35423579 ECH