Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0088 ATGGCTCAAAAGCATCTATCATATTTTGTTCCTCATAAAAAAAAACTACCCGAATCGCGTGTGTTGAGAGAAATAAGATCCTATTTCAGTGATATGGAGGTTGCGGAATTAACCTCGGAACAGGTATTGAGGAGGGATATCCCTTGGGAGACCTACATGGCGACTAAGCTGATCTCAGGCACAAACCTTCAGCTCTTGAGGCGTTATGATCATCGATCTCAAAGTCACAGAGAACAGTTGCTAGATGATGATGGTCCTGCTTATATTCGTGTATTTGTTCATGTTTTGCATGATATTTTTAAAGAGGAGACTGTCGAATATGTTTTGGCGTTGGTGGATGAAATGCTTGCAGCAAACCCAAAAAGGGCTAGATTGTTCCATGATAAGTCCCTTGCTGATGTAGATACCTATGAACCTTTCTTAAGATTGCTCTGGAAAGGGAATTGGTTCATTCAAGAGAAAAGTTGTAAGATCCTTGCTTCAATAGTTAGTGTCAGGCCAAAAAATCAAAATGGCTTTGTTACAAATGGAGAAGCATCAAACTCAAAGAAACCACTTACTACAATTGATGATGTTTTGACAGCATTGGTGAAATGGCTTTGTGAGCAGCTGAAGAAACCTTCTCATCCTAGTCGTGGCGTCCCAACTGCTGTCAATTGCCTGTCAACTTTACTCAAGGAACCCATGGTTAGGTCTTCCTTTGTTAAGGCAGACGGGGTCAAGTTGCTTGTACCTTTGATTTCACCTGCATCCACTCAACAATCAATTCAGCTTCTTTATGAAACGTGCCTCTGCATATGGCTTTTGTCTTATTATGAGCCTGCAATTGAGTACTTGGCTACTTCAAGATCCCTTCCGCGACTTATTGATGTCATAAAGAGCTCTACAAAAGAAAAGGTTGTTAGAGTTGTTGCCTTGACTTTTAAAAACTTGCTGTCAAGAGGAACATTGGGTGCTCAAATGGTTGACTTTCAGCTTCCACAAGTTGTTCAGAATTTGAAAGCACAAGCATGGAGCGATGAGGACTTGTTGGAGGCACTAAATTACCTGGAAGAAGGGCTTAGGGATAGCATTAAGAAACTAAGTTCTTTTGATGTGTACAAGCAAGAAGTTCTTTTTGGCAATCTGGACTGGTCTCCCATGCATAAAGATCCCGTATTTTGGCGAGAAAATATCACCAACTTTGAAGAGAATGACTTTCAGATTCTAAAAGTCCTAATAACAATTTTAGACACGTCTAGGGATCCTAGGACTCTGGCTGTTGCCTGTTTTGACCTTTCACAGTTCATAAATTACCATTCTGCTGGGAGGGTCATTGTGACGAACCTTAAAGCCAAAGAACGAGTAATGAAACTGATGAATCATGAGAATGCTGAGGTCACTAAAAATGCGTTGTTATGCATTCAAAGGCTTTTCTTGGGTGCCAAATTTGCAAGCTTCCTGCAGGCTTAG 1452 0.4084 MAQKHLSYFVPHKKKLPESRVLREIRSYFSDMEVAELTSEQVLRRDIPWETYMATKLISGTNLQLLRRYDHRSQSHREQLLDDDGPAYIRVFVHVLHDIFKEETVEYVLALVDEMLAANPKRARLFHDKSLADVDTYEPFLRLLWKGNWFIQEKSCKILASIVSVRPKNQNGFVTNGEASNSKKPLTTIDDVLTALVKWLCEQLKKPSHPSRGVPTAVNCLSTLLKEPMVRSSFVKADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRSLPRLIDVIKSSTKEKVVRVVALTFKNLLSRGTLGAQMVDFQLPQVVQNLKAQAWSDEDLLEALNYLEEGLRDSIKKLSSFDVYKQEVLFGNLDWSPMHKDPVFWRENITNFEENDFQILKVLITILDTSRDPRTLAVACFDLSQFINYHSAGRVIVTNLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKFASFLQA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0088 483 Pfam V-ATPase subunit H 360 472 IPR011987 GO:0000221|GO:1902600
Mibi10g0088 483 Gene3D - 375 475 IPR038497 -
Mibi10g0088 483 PIRSF V-ATP_synth_H 23 481 IPR004908 GO:0000221|GO:0046961|GO:1902600
Mibi10g0088 483 SUPERFAMILY ARM repeat 38 473 IPR016024 -
Mibi10g0088 483 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 32 482 IPR004908 GO:0000221|GO:0046961|GO:1902600
Mibi10g0088 483 SMART arm_5 433 473 IPR000225 GO:0005515
Mibi10g0088 483 SMART arm_5 227 271 IPR000225 GO:0005515
Mibi10g0088 483 SMART arm_5 272 313 IPR000225 GO:0005515
Mibi10g0088 483 FunFam V-type proton ATPase subunit H 374 475 - -
Mibi10g0088 483 Pfam V-ATPase subunit H 36 354 IPR004908 GO:0000221|GO:0046961|GO:1902600
Mibi10g0088 483 Gene3D - 28 362 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0088 Mibi-ChrMibi10 1409379 1416930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0088 32 483 Primary Pumps ATPases(2) AT3G42050 76.106 0.0 723