Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0087 ATGGCAGATCGCTTCTTTCTTGTCTTTGCAAAACTTTTTCTTTCAGTAATTCTCATCTCCTCCACTTCACACAGCACAGCTCAAACACAGAACAATAACAAAGGAGCAAACTTCTCATGCCCTATGGATGCACCCTCTTCCTGTGAAACATACGTCACATACTTTGCTCAGTCTCCCAATTTCCTGAGCATAACCAACATATCTGATTTATTTGGGATCAGTCCTCTTTCAATAGTAAGGGCAAGCAATATAGTGTTTGAGGATAACTATAAGCTTATTCCTGGCCAGCTCTTACTTGTCCCTCTGACTTGTAGCTGCACAGGAAATCATTCATTTGCCAACATCTCCTATGTCATGAAGAAAGGTGATAGCTTCCCCTTTGTTTCAACCTCTTTGTTTGAAAATCTCACCAATTGGAAAGCAGTGGAAGCTTTAAGTATTACTCTTAATCCACATCTCTTGCTAGTAGGGACCACTGTGATTTTCCCTTTGTTCTGTAGTTGTCCTTCAAAGACTCAGTTGCAAAATGGGATCAAGTTTCTAATTACCTATGTGTGGCAACCTGATGACAATTTGGCCACTGTAAGTTCAAAGTTTAATGCTTCTTCTTCAATGGACATTGTAACCGCAAATAACTATATGGACTTCACAAATTCAGTCAGCCTTCCAGTTTTGATCCCTGTTAGAAGCTTACCAGTACTTTCCCAACCTTACCCTTCATCTCAGAACAACAACAAAACAAAGCATCTTCCAGTTTTCATTGGTACATTCGTGGGGTCTTCCATTCCGGTCACTCTTATTTTAGCGATTCTACTATATGCTTACCGTATGAGGAAGAAAAGGAGGGGTTTGAATCGAAATACTTTGAGTTTGGAGACAGCTGATAAGATACTTCATGGGGTTTCTTGCTATGTAAGTAAGCCAATCATGTACGAAGCAGGAGTGATCATGGAGGCCACCAAGAAGCTTAATGAAAGGTGCAAGATTGGGAAATCAGTGTACAGAGCCAAAATTGAAGGGCAGATTGTGGCAGTTAAAAAGTTCAGGGACAAAAATGCCAAGGAGGAGTTATTAATGATGCAGAAGATGAACCACACAAATCTTGTGAAATTAAAAGGTGTCTCTTCAGACAATGATGGAAATTACTTCCTAGTTTATGAATATGCAGAAAATGGATCTCTTGATAATTGGCTTTATCCTTCAATCTCTATGTCCTTTCTCACATGGAATCAGAGGATAAGCATAGCACTAGATGTAGCCATGGGTCTGCAATACCTGCATGATCACACTCAACCAAGAATAGTCCATAGAAACATCACAGCAAGTAATATCCTTCTTGACTCCAAATTGAAAGCCAAGATAGCTAATTTCTCCATGGCCAGAACTTGCACGAATCTTGTGATGCTCAAGATTGATGTTTTTGCATTTGGGGTTGTTCTGTTGGAGCTGCTCACAGGGAAGAAAGGCATGGAAACGAATGAGAAAGGAGAGGTGATGATGCTTTGGAAGGAATTTATGGGGATATTTGATTTGGAAGAGGGAAGAGAAGAGAGACTCAGGCAATGGATGGATCCTAAGCTTGGAAGCTTTTATCCCATTGGTGATGCTCTTGACTTGGCTTCTCTGTCTCTGGCTTGCATTGTGGGTAAGTCTATGTCAAGACCAACCATGGGAGAAATTGTTCTGAGCCTCTCTCTTCTCATTCAATCATCTTCTCATGCTGCCTCCTTAAAGGGATCTTGCACTTTAGATTTCGAGGTTGATTCACTAAACAGTCCTGTCACAGCTCGTTGA 1794 0.408 MADRFFLVFAKLFLSVILISSTSHSTAQTQNNNKGANFSCPMDAPSSCETYVTYFAQSPNFLSITNISDLFGISPLSIVRASNIVFEDNYKLIPGQLLLVPLTCSCTGNHSFANISYVMKKGDSFPFVSTSLFENLTNWKAVEALSITLNPHLLLVGTTVIFPLFCSCPSKTQLQNGIKFLITYVWQPDDNLATVSSKFNASSSMDIVTANNYMDFTNSVSLPVLIPVRSLPVLSQPYPSSQNNNKTKHLPVFIGTFVGSSIPVTLILAILLYAYRMRKKRRGLNRNTLSLETADKILHGVSCYVSKPIMYEAGVIMEATKKLNERCKIGKSVYRAKIEGQIVAVKKFRDKNAKEELLMMQKMNHTNLVKLKGVSSDNDGNYFLVYEYAENGSLDNWLYPSISMSFLTWNQRISIALDVAMGLQYLHDHTQPRIVHRNITASNILLDSKLKAKIANFSMARTCTNLVMLKIDVFAFGVVLLELLTGKKGMETNEKGEVMMLWKEFMGIFDLEEGREERLRQWMDPKLGSFYPIGDALDLASLSLACIVGKSMSRPTMGEIVLSLSLLIQSSSHAASLKGSCTLDFEVDSLNSPVTAR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0087 597 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 573 - -
Mibi10g0087 597 SUPERFAMILY Protein kinase-like (PK-like) 310 564 IPR011009 -
Mibi10g0087 597 Pfam Protein tyrosine and serine/threonine kinase 339 463 IPR001245 GO:0004672|GO:0006468
Mibi10g0087 597 Gene3D Phosphorylase Kinase; domain 1 319 389 - -
Mibi10g0087 597 ProSiteProfiles Protein kinase domain profile. 291 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0087 597 FunFam Os07g0541700 protein 389 468 - -
Mibi10g0087 597 Gene3D Transferase(Phosphotransferase) domain 1 390 466 - -
Mibi10g0087 597 Gene3D Transferase(Phosphotransferase) domain 1 467 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0087 Mibi-ChrMibi10 1405491 1407284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0087 39 573 Receptor kinase-like Gene Family AT3G21630 29.322 1.18e-65 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi10g0087 PK_Tyr_Ser-Thr 4.8e-24 CL0016