Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0074 ATGAATCAACGTCCTATTGATCCTCAAATGGCCCTCTTCTCTCACCTATGCCCACCCACTTCTTACTCTCATCAAATCATCCCTCAACAAGGGGAAGTTAAGAGAAGACGACGTCGTAGCAAGAAGGAGAAGAACCAAGCTGTGGGAGAAGCCAAGAAGAGGAAGCTAAGTGAGGAGCAAGTGAAGCTTCTGGAACTAAACTTTGGGAAAGAACACAAGTTAGAGTCAGAGAGAAAGGACAGGCTAGCTTCAGAACTTGGTCTTGATCCTCGTCAAGTGGCCGTGTGGTTCCAAAACCGAAGGGCTCGATGGAAGAATCAGAAGTTGGAAGAAGCCTTCTCCAACCTCAAGCAACTCCATGAAACCTCCCTCCTAGAGAAAGCCCACCTCGAATCCGAGGTGTCGAAGCTGAAGGAGCAGCTTTCGAAAGCAGAGAAGGAGATCCAACGGCTATTAGAGAGAGGTGAGAGATCGGTGTCGAACGATGGTACCAATAGCCCAAGCTCATCGCACACAATGGAGGCTGTGGGGGACCCACTCTTTTTTGGGGAATTTGGAGATCAAGGTTACGATGTGGTCGACGATGATGTCTTGTTATACCCAACAGATCATTACATGAGTGGGTTGCAGGAATGGCTCAATTCTTACTTGTGA 654 0.4817 MNQRPIDPQMALFSHLCPPTSYSHQIIPQQGEVKRRRRRSKKEKNQAVGEAKKRKLSEEQVKLLELNFGKEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNQKLEEAFSNLKQLHETSLLEKAHLESEVSKLKEQLSKAEKEIQRLLERGERSVSNDGTNSPSSSHTMEAVGDPLFFGEFGDQGYDVVDDDVLLYPTDHYMSGLQEWLNSYL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0074 217 FunFam homeobox-leucine zipper protein ATHB-40 44 115 - -
Mibi10g0074 217 Coils Coil 99 154 - -
Mibi10g0074 217 MobiDBLite consensus disorder prediction 28 54 - -
Mibi10g0074 217 ProSitePatterns 'Homeobox' domain signature. 82 105 IPR017970 GO:0000981|GO:0006355
Mibi10g0074 217 CDD homeodomain 52 108 IPR001356 GO:0003677
Mibi10g0074 217 SUPERFAMILY Homeodomain-like 51 114 IPR009057 -
Mibi10g0074 217 Pfam Homeodomain 52 106 IPR001356 GO:0003677
Mibi10g0074 217 PRINTS Lambda-repressor HTH signature 78 87 IPR000047 GO:0003677
Mibi10g0074 217 PRINTS Lambda-repressor HTH signature 87 103 IPR000047 GO:0003677
Mibi10g0074 217 MobiDBLite consensus disorder prediction 158 173 - -
Mibi10g0074 217 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 32 165 IPR045224 GO:0003700
Mibi10g0074 217 SMART HOX_1 50 111 IPR001356 GO:0003677
Mibi10g0074 217 MobiDBLite consensus disorder prediction 153 173 - -
Mibi10g0074 217 ProSiteProfiles 'Homeobox' domain profile. 47 107 IPR001356 GO:0003677
Mibi10g0074 217 Gene3D - 46 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0074 Mibi-ChrMibi10 1188037 1189384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0074 1 217 Homeobox Transcription Factor Family AT2G18550 50.439 8.23e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mibi10g0074 Homeodomain 2.4e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1938 12 35686709 35688340 Mibi10g0074 10 1188037 1189384 CCT
Mibi10g0074 10 1188037 1189384 Mibi10g0074 10 1188037 1189384 ECH