Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0011 ATGAGAACGCTTTGTGAAGCTTGTGAGAGCGCCGCCGCCATCGTTTTCTGCGCCGCCGATGAGGCCGCTCTCTGCCGTGCCTGTGACGAGAAGGTTCATATGTGCAATAAGCTAGCTAGCCGGCATGTAAGGGTTGGTCTGGCAAGTCCAAGTGATGTGCCTCCCTGTGACATCTGTGAAAATGCACCTGCGTTCTTCTATTGCGAGACAGATGGAAGTTCACTTTGCTTGCAGTGTGACATGATGGTTCATGTTGGGGGTAAACGAACGCATGGAAGATATCTTCTTTTCAGGCAGAGAGTTGAGTTTCCAGGAGATAAAACTGGTCTTCCAGAAAACTCAGCTTCACTGCCTCTGGAACCTGGTGAGACTAAAAGAGGACAAAATCCTCTGCCTGAACTAAAAGTGGGAGGGACACAGCAAAGCCATAGGCTATCTCTGGTTGCAGAACCTGAAAATGATGCTGACGGCCTTGCCATGATGGAAACTAACATGATTGATTTGAACATGAAGCCTCAGAGAATACATGAACAAGCTTTCAATAATCCGCCATAA 555 0.4793 MRTLCEACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPPCDICENAPAFFYCETDGSSLCLQCDMMVHVGGKRTHGRYLLFRQRVEFPGDKTGLPENSASLPLEPGETKRGQNPLPELKVGGTQQSHRLSLVAEPENDADGLAMMETNMIDLNMKPQRIHEQAFNNPP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0011 184 FunFam B-box zinc finger protein 19 2 92 - -
Mibi10g0011 184 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Mibi10g0011 184 SUPERFAMILY B-box zinc-binding domain 48 86 - -
Mibi10g0011 184 MobiDBLite consensus disorder prediction 107 143 - -
Mibi10g0011 184 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 124 - -
Mibi10g0011 184 CDD Bbox1_BBX-like 55 96 - -
Mibi10g0011 184 Gene3D Classic Zinc Finger 2 91 - -
Mibi10g0011 184 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Mibi10g0011 184 Pfam B-box zinc finger 53 90 IPR000315 GO:0008270
Mibi10g0011 184 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mibi10g0011 184 SMART bboxneu5 1 47 IPR000315 GO:0008270
Mibi10g0011 184 SMART bboxneu5 51 96 IPR000315 GO:0008270
Mibi10g0011 184 CDD Bbox1_BBX-like 4 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0011 Mibi-ChrMibi10 297645 299329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0011 1 182 C2C2-CO-like Transcription Factor Family AT4G38960 62.637 4.14e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mibi10g0011 zf-B_box 4.1e-07 No_clan