Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2441 ATGAGATATCACCCGTCTGGGCGAAGAGTGCTGCAGCCTCAGTTGCGAATCGGGGAGACGATGGGGGCGTACAAGTACGTGTCGGAGTTATGGCGGAAGAAGCAGTCAGATGTGATGAAATTCTTGCAGAGGGTGAGGTGCTGGGAGTACCGTCAGCAGCCGTCGATCGTGAGGGTGACGAGGCCAACCCGACCCGACAAGGCTCGTCGGCTGGGGTACAAGGCGAAGCAGGGCTATGTGGTGTACCGCGTGCGTGTGAAGAGAGGCGGTCGCAAGAGGCCTGTTCCCAAGGGTATTGTCTATGGCAAGCCTACCAATCAAGGTGTCACCCAGCTCAAATTCCAACGCAGCAAGAGGTCTGTTGCTGAGGAGCGAGCTGGCCGCAAGCTGGGCGGCCTTAGGGTTCTCAATTCTTACTGGGTCAACGAGGATTCCACCTACAAGTACTTCGAGGTCATCCTGGTGGATGTTGCCCACAACGCCGTTCGCAATGACCCCAGAATCAATTGGCTCTGCAACCCCGTCCACAAGCACAGGGAGCTCCGTGGCCTTACCTCTGCCGGCAAGAAATACAGGGGCTTACGTGGCAGGGGTCATCTTCATCACAAAGCCCGCCCTTCTCGCAGGGCCACCTGGAAGAGGAACAATACCCTCTCCCTTCGTCGATACCGCTGA 675 0.5748 MRYHPSGRRVLQPQLRIGETMGAYKYVSELWRKKQSDVMKFLQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVKRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEVILVDVAHNAVRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLHHKARPSRRATWKRNNTLSLRRYR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2441 224 Gene3D Ribosomal protein l15e 21 224 IPR024794 GO:0003735|GO:0005840
Mibi09g2441 224 ProSitePatterns Ribosomal protein L15e signature. 66 89 IPR020925 GO:0003735|GO:0005840|GO:0006412
Mibi09g2441 224 PANTHER RIBOSOMAL PROTEIN L15 21 224 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mibi09g2441 224 FunFam Ribosomal protein L15 21 224 - -
Mibi09g2441 224 Pfam Ribosomal L15 22 210 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mibi09g2441 224 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 21 215 IPR012678 GO:0003735|GO:0005840|GO:0006412
Mibi09g2441 224 SMART Ribosomal_L15e_2 22 213 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2441 Mibi-ChrMibi09 43877662 43878542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2441 21 224 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 90.686 8.97e-127 355