Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2431 ATGAGGAAGGGATCGTCGTCGTCGAAGGGGGGGTGCTGCAGCAAGGTGGGGCTGAAGAGGGGGCCGTGGACGGCGGAGGAGGACGAGGTGCTGAGGAGATACATAGAGAAGGAGGGGGAGGGGAGGTGGCGGACGCTGCCCAAGAGGGCGGGGCTGCTGAGGTGGTCGTTGATAGCGGGTCGGATACCGGGGAGGACGGACAACGAGATAAAGAACTACTGGAACACCCACCTCAGCAAGAAGCTCATCCGCCAGGGCATCGATCCCCGCACCCACAAGCCTTTACTCTCTTCCTCCTCCACATCCACCTCCACCTCCACCTCCACCTCCACTCCTCCTACTAAGAAGCCTCCTCCTCCTCCTGCTGCAATAGTATCATCATCATCAGAGGAGGAGGACAACAACAACCATATGATGATGATGATGGTGGTGATGGATCCCTACACTAGCACTCCTACTCCTCACTCCCCCGCTGCCTTGGATCCTCATGTGCCTCCAGCTGCACCCGTCCCCTTCCCCACTATCCCAATCACCACCTCCGCCACTCCCCACGACAACGACGACATCAACAACTACTACTGCACCGATGATGTTTTCTCCTCTTTCCTCAACTCCCTCATCAACGACGACCCCTTCTCCCACCCCCATCCTCCCACCACTATGCCCTCCCCCCCTCACCCTCACCCTCACCCTCACCCTCTCTAG 705 0.5901 MRKGSSSSKGGCCSKVGLKRGPWTAEEDEVLRRYIEKEGEGRWRTLPKRAGLLRWSLIAGRIPGRTDNEIKNYWNTHLSKKLIRQGIDPRTHKPLLSSSSTSTSTSTSTSTPPTKKPPPPPAAIVSSSSEEEDNNNHMMMMMVVMDPYTSTPTPHSPAALDPHVPPAAPVPFPTIPITTSATPHDNDDINNYYCTDDVFSSFLNSLINDDPFSHPHPPTTMPSPPHPHPHPHPL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2431 234 Gene3D - 17 84 - -
Mibi09g2431 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 82 IPR017930 -
Mibi09g2431 234 PRINTS Proline rich extensin signature 214 231 - -
Mibi09g2431 234 PRINTS Proline rich extensin signature 162 183 - -
Mibi09g2431 234 PRINTS Proline rich extensin signature 111 123 - -
Mibi09g2431 234 PRINTS Proline rich extensin signature 145 157 - -
Mibi09g2431 234 MobiDBLite consensus disorder prediction 92 111 - -
Mibi09g2431 234 MobiDBLite consensus disorder prediction 85 131 - -
Mibi09g2431 234 SMART sant 19 80 IPR001005 -
Mibi09g2431 234 Pfam Myb-like DNA-binding domain 20 78 IPR001005 -
Mibi09g2431 234 MobiDBLite consensus disorder prediction 215 234 - -
Mibi09g2431 234 ProSiteProfiles Myb-like domain profile. 15 78 IPR001005 -
Mibi09g2431 234 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 54 137 - -
Mibi09g2431 234 CDD SANT 22 78 IPR001005 -
Mibi09g2431 234 MobiDBLite consensus disorder prediction 210 234 - -
Mibi09g2431 234 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2431 Mibi-ChrMibi09 43756130 43757057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2431 12 217 MYB Transcription Factor Family AT3G13540 40.726 5.04e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi09g2431 Myb_DNA-binding 4.8e-12 CL0123