Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2421 ATGTTATCTAGGGTAACCAGCCTCTCAGCATCGGGATATCGTTACTCAGTTCCGCCGCGCCGCCTGCTCCAAGTCCGATCTCGTCATCCGCCGCTACTTGCTAAGATGAGAGGAAGAAGCTACAGTCCATCGCCGCCCAGGGGTTATGGCCGAAGAGGAAGAAGTCCTAGTCCCAGAGGTCGTTATGGTGGCCGTGCCAGAGATCTCCCCACCAGCCTTCTAGTTCGCAACCTTCGCCATGACTGTAGGGCTGAGGATCTTCGTAGACTTTTTGGGCAATTTGGTTCTCTCAAGGACATTTACCTCCCGAAAGATTATTATACTGGAGAACCCCGAGGCTTTGGTTTTGTCCAGTATGTAGATCCTGCTGATGCTGCGGATGCAAAATATCATGTGGATGGCCAAGTTCTTCTTGGTCGAGAGTTGACTGTTGTTTTTGCTGAGGAGAACAGAAAGAAGCCGACTGAGATGAGAGCAAGAGAAAGAAGGGGCCGATTTTCTGATCGAAGGAGGTCTCCACCTCGTTATTCTCGTTCTCCTCGATACTCTAGGTCACCACCACGTCATAGATCTCGGTCTCGGAGCCGTGATTATTATTCCCCCCCTCCTAAAAGAAGGGAGTATTCAAGATCTGTGTCACCTGAAGATAAAAGATACAGTCGAGAAGGAGAGAGAGAAAGATCGTACTCACGGCAGAGTAGGGAGAGGTCATACTCACGCTCTCCGCCCCATAATGGTGGCTCTAGGAGCCGCAGTCAGAGTCCAGCTAAGGGCCCAAGCCGGAGCCTCAGTCAGAGTCCCAATCATGATGATTATCCAAGGGAACCAACTCGTGGTAGGCCCCCCAGTCAATGA 855 0.5135 MLSRVTSLSASGYRYSVPPRRLLQVRSRHPPLLAKMRGRSYSPSPPRGYGRRGRSPSPRGRYGGRARDLPTSLLVRNLRHDCRAEDLRRLFGQFGSLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHVDGQVLLGRELTVVFAEENRKKPTEMRARERRGRFSDRRRSPPRYSRSPRYSRSPPRHRSRSRSRDYYSPPPKRREYSRSVSPEDKRYSREGERERSYSRQSRERSYSRSPPHNGGSRSRSQSPAKGPSRSLSQSPNHDDYPREPTRGRPPSQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2421 284 SMART rrm1_1 72 145 IPR000504 GO:0003723
Mibi09g2421 284 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 70 261 - -
Mibi09g2421 284 MobiDBLite consensus disorder prediction 239 270 - -
Mibi09g2421 284 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 71 149 IPR000504 GO:0003723
Mibi09g2421 284 MobiDBLite consensus disorder prediction 26 66 - -
Mibi09g2421 284 MobiDBLite consensus disorder prediction 152 175 - -
Mibi09g2421 284 Gene3D - 64 182 IPR012677 -
Mibi09g2421 284 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 73 142 IPR000504 GO:0003723
Mibi09g2421 284 SUPERFAMILY RNA-binding domain, RBD 71 176 IPR035979 GO:0003676
Mibi09g2421 284 MobiDBLite consensus disorder prediction 152 284 - -
Mibi09g2421 284 MobiDBLite consensus disorder prediction 192 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2421 Mibi-ChrMibi09 43592505 43596290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2421 71 201 Eukaryotic Initiation Factors Gene Family AT4G34110 25.954 1.62e-09 56.6