Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2385 ATGAGCAGTTCAGGACCTAGGGAAGACCAGGAGGCTGCTACAGATTTTCAAAATCAGCAAATCGTGGTTTTTGACTTGGACCTCAACCTTCCTCTTCCTGAGGAGAGCCTGGATGCAGCAGCTCAAGGATCAGCCCTGGGTAATGAAAATTTGCATTTGCAGATAGGTGTTGCTGAACTCGATGAGGTCGTTGTAATCTCCCCAAGAAAATTTGAAGAAGCAAAGAACAAGTCTCGGAGAAAAAATGCTCGTCAAAGCTATGCGGTTATACAAGTGTTTGATGAAGATAGAGGAAACATTTCAGAAGTGACAGCAGATGCAGTTTCTCACCCTGTTATTGACAACAGACATGAAAATCCACAAAACCAAGAAACTGTGGACTGTGAGCTGCATCTAGGCGTGAAGGACAGTAGGATAGCCAAGGCGCCGTCCCCAAGTGGGGTGCTACCCGAGGAACCCACCTTCAGTTGCACAATATGCATGGGCCAGCTGATTGAAGAGACATCAACTAAGTGCGGCCACATTTTCTGCAAGAAGTGCATCCAGGCAGCCATAGCTGCTCAACACAAATGTCCCACCTGCAGGCGTAAGCTAAGAAAGTCTGACATGTTTAGGGTCTACCTTCCAACAGCTAACTAA 639 0.4679 MSSSGPREDQEAATDFQNQQIVVFDLDLNLPLPEESLDAAAQGSALGNENLHLQIGVAELDEVVVISPRKFEEAKNKSRRKNARQSYAVIQVFDEDRGNISEVTADAVSHPVIDNRHENPQNQETVDCELHLGVKDSRIAKAPSPSGVLPEEPTFSCTICMGQLIEETSTKCGHIFCKKCIQAAIAAQHKCPTCRRKLRKSDMFRVYLPTAN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2385 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 210 IPR013083 -
Mibi09g2385 212 SMART ring_2 157 194 IPR001841 -
Mibi09g2385 212 ProSitePatterns Zinc finger RING-type signature. 172 181 IPR017907 -
Mibi09g2385 212 SUPERFAMILY RING/U-box 156 200 - -
Mibi09g2385 212 Pfam Zinc finger, C3HC4 type (RING finger) 157 194 - -
Mibi09g2385 212 PANTHER ELFLESS, ISOFORM B 2 211 - -
Mibi09g2385 212 ProSiteProfiles Zinc finger RING-type profile. 157 195 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2385 Mibi-ChrMibi09 43315098 43317431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2385 61 210 C3H Transcription Factor Family AT5G48655 40.000 2.08e-26 99.4