Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2376 ATGTCAAGCACAGTCACTGTGATAAGAAGGCGAGAGGCGAAACCCAGACACAAGATTGAGACATCCACAAAACAAAGAGAGATGCGTTGCTATGTCGTGACGATTCCCGGAAGCGATTATCGCTTCTTCTCCTCAAATCCCTTATCTGTTCCCTCCGGCCACAGCCAGAGCCCCAATTTCACTCACAAATCCCTCAATTTCCCATGTCGGATCGGCGCTTTTGGTTCCCTGAGAGTTAAAGCCGCCGTCAACGAGGGCTATGTGGCGGAGGCCTCCAAGCTGAGCTTCTACGAGCTTCTGGGTATACCCGAATCTGGTTCCTTGATCGAAATCAAGCAGGCTTACAAGCAGTTAGCTCGAAAGTACCATCCTGATGTGTCGCCGCCAGATCGGGTTGAGGAGTACACCAAGAGGTTTATTCAGGTTCAGGAGGCCTATGAGACCTTGTCTGATCCCAGAAGGAGGGCTTTGTATGATAGAGACATGGCCAGAGGGATTCACTTTGCCTTCTCCGCTCGCCGCTGCTATTACGACGATGAGGTAATTGAACAAAAAAGTGAGTGGAAAGGTCGTTGGCAGAGTCAGCTATCAGAGCTGAAGAGAAGAAGCAAGGCCAAGGAGAATGGAGAAAATCTTTCGTGGGCAGCTCAGATGCGACGTAAAAGAGCAGAATCTGAATAA 681 0.4978 MSSTVTVIRRREAKPRHKIETSTKQREMRCYVVTIPGSDYRFFSSNPLSVPSGHSQSPNFTHKSLNFPCRIGAFGSLRVKAAVNEGYVAEASKLSFYELLGIPESGSLIEIKQAYKQLARKYHPDVSPPDRVEEYTKRFIQVQEAYETLSDPRRRALYDRDMARGIHFAFSARRCYYDDEVIEQKSEWKGRWQSQLSELKRRSKAKENGENLSWAAQMRRKRAESE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2376 226 SUPERFAMILY Chaperone J-domain 92 168 IPR036869 -
Mibi09g2376 226 PRINTS DnaJ domain signature 115 130 IPR001623 -
Mibi09g2376 226 PRINTS DnaJ domain signature 134 154 IPR001623 -
Mibi09g2376 226 PRINTS DnaJ domain signature 97 115 IPR001623 -
Mibi09g2376 226 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 89 225 - -
Mibi09g2376 226 MobiDBLite consensus disorder prediction 1 21 - -
Mibi09g2376 226 MobiDBLite consensus disorder prediction 203 226 - -
Mibi09g2376 226 Pfam DnaJ domain 96 159 IPR001623 -
Mibi09g2376 226 ProSiteProfiles dnaJ domain profile. 95 162 IPR001623 -
Mibi09g2376 226 ProSitePatterns Nt-dnaJ domain signature. 139 158 IPR018253 -
Mibi09g2376 226 FunFam Chaperone protein dnaJ 20, chloroplastic 81 190 - -
Mibi09g2376 226 CDD DnaJ 96 151 IPR001623 -
Mibi09g2376 226 Gene3D DnaJ domain 82 185 IPR036869 -
Mibi09g2376 226 SMART dnaj_3 94 154 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2376 Mibi-ChrMibi09 43238971 43240546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2376 91 159 C2H2 Transcription Factor Family AT1G74250 41.667 1.14e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g2376 09 43238971 43240546 Mibi09g2376 09 43238971 43240546 ECH