Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2368 ATGGCATTCTGCAATAAACTTGGGAATCTATTAAGGCAGGGTGCTACACAAAACAAACAAGTTCCAGTTGCATCATTGCTGAATTATGTTCGCTGCATGTCATCCTCCAAGCTTTTCATTGGCGGCCTTTCTTATGGAGTTGATGATCAATCTCTCAGGGATGCATTTGCCAGCTTTGGAGATGTGGTCGAGGCAAGGGTTATAACTGATAGAGACACTGGAAGGTCAAGAGGGTTTGGATTTGTCAATTACTCTAGTGACGAGTCTGCAAGTTCAGCTATCTCTGCAATGGATGGGCAGGAGCTAAATGGGAGAAACATTCGGGTGAGCTATGCAACTGATAGACCAGCCAGACCTCAATCCTTTGGTGGCGGAGGCGGATTTGGCGGTGGCAGATATGGTGGCGGTGGCGGTGGTTATCGTAGGGATGATGGCGGTTTTGACAATCCTTCATTTTAA 459 0.4684 MAFCNKLGNLLRQGATQNKQVPVASLLNYVRCMSSSKLFIGGLSYGVDDQSLRDAFASFGDVVEARVITDRDTGRSRGFGFVNYSSDESASSAISAMDGQELNGRNIRVSYATDRPARPQSFGGGGGFGGGRYGGGGGGYRRDDGGFDNPSF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2368 152 SMART rrm1_1 37 110 IPR000504 GO:0003723
Mibi09g2368 152 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 33 140 - -
Mibi09g2368 152 SUPERFAMILY RNA-binding domain, RBD 32 146 IPR035979 GO:0003676
Mibi09g2368 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Mibi09g2368 152 MobiDBLite consensus disorder prediction 115 152 - -
Mibi09g2368 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Mibi09g2368 152 Gene3D - 16 149 IPR012677 -
Mibi09g2368 152 FunFam Glycine-rich RNA-binding protein 2 25 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2368 Mibi-ChrMibi09 43168872 43170112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2368 36 121 Eukaryotic Initiation Factors Gene Family AT1G49760 38.202 1.46e-11 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g2368 09 43168872 43170112 Mibi09g2368 09 43168872 43170112 ECH